Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq3431 93.3 4e-14 seq2921 87.8 2e-12 >seq3431 Length=10244 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/211 (71%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581 |||||| ||||||||||| || |||||||| || || | || || ||||||| |||| Sbjct 1119 ATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTCCGTCCGTCCTCGAGCT 1177 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 | || ||| | | || | |||||||| ||| || | | ||||||||| || | Sbjct 1178 GTTTTCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCT 1237 Query 48642 TCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACC 48699 | ||||| | | || ||||| |||| |||||| ||||| || || || || || Sbjct 1238 TGGTCTTGACGTTGTCG--ATGGTGTCGGAGGACTCCACCTCGAGGGTGATCGTCTTGCC 1295 Query 48700 GGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 |||||| || || || || ||||||||| || Sbjct 1296 GGTGAGGGTCTTGACGAAGATCTGCATCTTG 1326 >seq2921 Length=71014 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 |||||| || |||||||| || | | | || || ||||||| |||||||| ||| || Sbjct 18142 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGC-CGTCCTCGAGCTGCTTGCCGGCGA 18200 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--T 48651 | || | ||||||||| ||| || | | ||||||||| || || ||||| | Sbjct 18201 AGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGTCTTGACGT 18260 Query 48652 AGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTT 48711 | || || || |||| ||||||| ||||| || || || || || ||||| || || Sbjct 18261 TGTCG--ATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCCGTGAGGGTCTT 18318 Query 48712 CACAAAAATCTGCAT 48726 || ||||||||||| Sbjct 18319 GACGAAAATCTGCAT 18333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421232789479586