Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2057 161 1e-34 seq2146 147 3e-30 >seq2057 Length=22280 Score = 161 bits (178), Expect = 1e-34 Identities = 374/558 (67%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| ||||||||||||| || || | |||||||| |||||||| Sbjct 16417 CACGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGG 16476 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| || || ||||| || ||||| || ||||| ||||| || ||||| ||||| Sbjct 16477 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGACCCAGAGAAGAAG 16536 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTCATGT 32837 || || || || || || ||||| || | || ||| || | || || |||| | Sbjct 16537 ATGCCCTCCACGGCGGCGAAGGCGATCAATCGCTCAGCAAAGGTCGATTCGGTGTCGTTG 16596 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||||| ||||| |||||||| | || || ||| || ||||| || |||| | Sbjct 16597 ATCCACCGCATGGCCCACTCGGCCTTTTGCTTGACGACAGGGATGGTCTCCATGGCATCA 16656 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 ||||| || | || | | || || ||||| || || | ||| || | Sbjct 16657 AAGAGGTACTCGCGTTGCTGAGGGTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTC 16716 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 ||||| |||||||| || || || || || ||||||||||||| |||||| | Sbjct 16717 TCCGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCT 16776 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 || || || | || ||| || || | | || || || || || ||||| ||||| Sbjct 16777 TGCACCTCCGAACTAAACCGCTCGACGAGGTTCTCGTTGACAATACCGTCTGATGCTGCG 16836 Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT--AGT--TTATTCCA 33133 || || || | || || | ||||| | || | || ||| | | || | ||| Sbjct 16837 AAGAAGGCGAGGACGTGGCTGATAAAGTGACGCTCAT-TGTCGTTCAACTTGTTGTCCCA 16895 Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193 || | || || || || | || | || || | ||||| || |||||||||||||| Sbjct 16896 GTCGTGCATGTCCTTGGAAAGGTCGATCTCCTCAGCAGTCCAGAACGATGCCTCTGCCTT 16955 Query 33194 TTTATACATATTCCAGAT 33211 || ||||| | |||||| Sbjct 16956 CTTGTACATTTGCCAGAT 16973 >seq2146 Length=21837 Score = 147 bits (162), Expect = 3e-30 Identities = 441/678 (65%), Gaps = 2/678 (0%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||| || || || | || | | | || || || || ||| | || ||||| | |||| Sbjct 16206 TCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCACATGAGCGAC 16147 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 |||||||||| | | ||||| ||||| || | || ||||||||||| || || Sbjct 16146 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAGGGCGTAGAAG 16087 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | || | | ||||| || || ||||| | || ||||||||| | | Sbjct 16086 AGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 16027 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | || || ||||| || || | ||| ||||| | | | || || || ||||| || ||| Sbjct 16026 ACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTTGTTGCCACCC 15967 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | ||| | ||||||||| || | |||| | ||| |||| ||| || ||||| Sbjct 15966 TGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGAG 15907 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 63351 || ||||| || | || || || || | || || | | | || | || || Sbjct 15906 ACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGAT-GCAGTGAATGTTGAGCCC 15848 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411 || || || ||| | || ||| | ||||| || | || || |||||||| || Sbjct 15847 GATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCGTAGATGCCATC 15788 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471 || |||||| |||| | | || || ||| ||||| ||| | ||||| Sbjct 15787 GATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGGTTGGGTGTTCC 15728 Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63531 ||||| || | ||| || || ||||| || || | || || || | || ||||| || Sbjct 15727 GGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 15668 Query 63532 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63591 || || || ||| || |||| ||||| || || ||||| ||||| | ||| || Sbjct 15667 GTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCGCATGAGCATATG 15608 Query 63592 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63651 || || || || ||| |||| ||| || || || || || || | ||| || Sbjct 15607 TTGCGGCCTCTCGGCGACCTTGCCGTTAATGCGCAGCAGATAAGAGCGCTCGAGAGTCTT 15548 Query 63652 AAAACCAAAATAGTTGTA 63669 || || || ||||| || Sbjct 15547 GAAGCCGAAGTAGTTCTA 15530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633603597445600