Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1890 194 3e-44 seq2921 158 2e-33 seq1114 156 8e-33 seq3431 138 2e-27 seq1768 109 1e-18 seq2057 105 1e-17 >seq1890 Length=49107 Score = 194 bits (214), Expect = 3e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||||||| || || ||||| || |||||||| || |||||| Sbjct 41803 CCACCGCGCAGGCGAAGGACCAAGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAG 41862 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | ||||||||| || ||| Sbjct 41863 AGCGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCCGGCGGA 41922 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||||| |||||| || |||||||||| || || || Sbjct 41923 ATGCCCTCCTTGTCCTGGATCTTTGTCTTGACATTGTCAATGGTGTCTGAAGACTCGACC 41982 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || || ||||||||||| |||||||| Sbjct 41983 TCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 42029 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| |||||||| || || ||||| ||||||||||| || || || Sbjct 41575 CCACCGCGGAGACGCAGGACCAAGTGGAGTGTCGACTCCTTTTGGATGTTGTAGTCCGAA 41634 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| ||||| || || | | |||||||| || ||| Sbjct 41635 AGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGTTGGTCCGGGGGA 41694 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||||| |||||| ||||||||||||| ||||| || Sbjct 41695 ATGCCCTCCTTGTCCTGGATCTTTGTCTTGACATTGTCGATGGTGTCTGAAGATTCAACC 41754 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || || ||||||||||| |||||||| Sbjct 41755 TCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 41801 Score = 181 bits (200), Expect = 2e-40 Identities = 183/238 (77%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 68224 GATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGT 68283 |||| || | || ||||| || || | |||||||| || |||||||| || || |||| Sbjct 46541 GATTCTACTGGCCACCGCGGAGACGGAGCACCAAGTGGAGTGTGGACTCCTTCTGAATGT 46482 Query 68284 TATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTT 68343 | || || ||||| || | || || || | ||||| || ||||| ||||| | |||| Sbjct 46481 TGTAGTCAGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGTT 46422 Query 68344 GGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG 68403 |||| || |||||||| ||||||||||| ||||| | ||| ||| ||||| ||||| | Sbjct 46421 GGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGTCTTTACGTTGTCGATTGTGTCCG 46362 Query 68404 CTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || | ||||||||| || || || |||||||||||||| |||||||| Sbjct 46361 ATGATTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 46304 Score = 159 bits (176), Expect = 6e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| ||||||||||| || ||||| Sbjct 42031 CCACCACGCAGGCGAAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAA 42090 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| ||||| | |||||||| || || Sbjct 42091 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGG 42150 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||||||| |||||||| |||| || || || Sbjct 42151 ATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTATCTGAGGACTCGACC 42210 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450 || | ||||||||| || || || || ||||| ||| Sbjct 42211 TCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTAACG 42246 Score = 159 bits (176), Expect = 6e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || |||||||| ||||||||||| || |||||| Sbjct 46302 CCACCACGGAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAG 46243 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || || || | ||||||||| || ||| Sbjct 46242 AGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGACGTTGTTGGTCCGGAGGA 46183 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||||||||||| || || || Sbjct 46182 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCTGAGGACTCGACC 46123 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450 || | ||| ||||| || || || || ||||| ||| Sbjct 46122 TCGAGGGTAATGGTCTTGCCAGTAAGAGTCTTAACG 46087 >seq2921 Length=71014 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || || || Sbjct 18107 CCACCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 18166 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || ||||| || || Sbjct 18167 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 18226 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||||||| ||||| ||||| | || || || Sbjct 18227 ATTCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 18286 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || |||||||||||||||||||| |||||||| Sbjct 18287 TCGAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 18333 >seq1114 Length=26360 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| || | ||| || || || || || |||||||| || || || Sbjct 18741 CCGCCGCGCAGACGCAGGACGAGGTGCAGGGTCGATTCCTTCTGGATGTTGTAGTCCGAC 18800 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| ||||| || ||||| | |||||||| || || Sbjct 18801 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCCGGAGGG 18860 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| | ||||||| || || ||||| | ||| || || Sbjct 18861 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGATGACTCCACC 18920 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | |||||| || || || ||||| ||||| || || |||||||| ||| Sbjct 18921 TCGAGGGTGATCGTCTTGCCTGTGAGAGTCTTCACAAAGATCTGCATGATG 18971 >seq3431 Length=10244 Score = 138 bits (152), Expect = 2e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| || || ||| ||| || |||||||| || ||| || |||| || || || Sbjct 1114 ACCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGTCCGTCCTCG 1173 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || ||||| || ||||| | || ||||| || || || || |||||||| || Sbjct 1174 AGCTGTTTTCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGG 1233 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||||||| ||||||||||| | || || || || | |||||| || || Sbjct 1234 ATCTTGGTCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATCGTCTTG 1293 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||||||||| |||||||| Sbjct 1294 CCGGTGAGGGTCTTGACGAAGATCTGCAT 1322 >seq1768 Length=22925 Score = 109 bits (120), Expect = 1e-18 Identities = 321/485 (66%), Gaps = 16/485 (3%) Strand=Plus/Plus Query 225517 CCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGC 225576 ||| || | |||| |||||||| |||||| || || ||||| || ||||| ||||| || Sbjct 8628 CCAGGCGATGTTGACGACGTCCAAGTGGTTGGTGGGCTCGTCGAGGAGCAGAATGTCGGC 8687 Query 225577 ATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCC 225636 | | ||| | ||| || | ||| | |||||||| |||||||| ||||| |||||| | Sbjct 8688 CTTGAAGAGCACGGCACGGGCGAGGGCGAGCTTCATCTTCCAGCCACCGGAGAGGGAGGC 8747 Query 225637 GATTGAAACAGAGTGCTTA-GCTTC--GTCAAAGCCGTACTC--CAGGAGCGTCTGGATA 225691 ||| | | || || | ||||| ||| ||||| ||| || ||| | ||| | Sbjct 8748 GATGGGA---GAACCCTGACGCTTCTCGTCGAAGCCCATCTCGTCAAGAGTG-CTG---A 8800 Query 225692 ATGCGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTAATCATATACG 225751 || ||| ||| | || | || | | |||| | || ||| || | | Sbjct 8801 CAGC-CTCTTCCCGGCT-CACGCTGAGGCGGTCG--TCGGTCATGATGTAGTCGAGAATG 8856 Query 225752 GTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAA 225811 | ||| || |||| |||| | ||||| || |||||| || |||| || Sbjct 8857 GACATCTCACCCTCAGAGCCGTCGAGATCGTGCTCGACGTACCAGGTGCGGACCTCGTCG 8916 Query 225812 GCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCC 225871 | ||||| ||||| | ||||| || || || || | || || |||||| Sbjct 8917 GGGGAAGGGAAACCCTCGACTTGGCCGTTCTGGATGGCGCGCATGAGAGTGGACTTGCCG 8976 Query 225872 GCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAG 225931 | |||||| | || ||| ||||| | | || ||||||| | |||| | | | Sbjct 8977 GAACCGTTGCGGCCACAGAGACCGTAGCGGTGGCCACGCTTGAGGCGGAGGGTAGCAGTG 9036 Query 225932 TTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCC 225991 |||||||| |||||| |||| ||||| || ||||||| || | ||||| |||||||||| Sbjct 9037 TTCAGGAGAATCTTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACCC 9096 Query 225992 TCCTC 225996 ||||| Sbjct 9097 TCCTC 9101 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/160 (75%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 224465 ACACCGCCGCCGAATGACTCAAGGGC--GGATGAAAGCGCGCCAAGCGACTCGCGGTCAA 224522 |||||||| | | |||| ||||| |||||| || ||||| ||||||||||||| | Sbjct 7491 ACACCGCCCTGGTACGACTTGAGGGCCTGGATGAGGGC-CGCCA-GCGACTCGCGGTCCA 7548 Query 224523 GGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCACAGGGCTGCACCAA 224582 ||||||||| ||||| || |||| || || |||||| |||| ||| ||||| | Sbjct 7549 AGAAGTTCGTGGGCTCGTCGAGGACGACAATGTGGGGCTTGCGCCATGTGGCGGCACCGA 7608 Query 224583 CCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGAT 224622 ||| | ||| ||||||||||| ||||| || || || || Sbjct 7609 GCACAATCTTGACCTTCTGACCACCAGACAGACCACGCAT 7648 >seq2057 Length=22280 Score = 105 bits (116), Expect = 1e-17 Identities = 532/831 (64%), Gaps = 35/831 (4%) Strand=Plus/Plus Query 9975 AAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG 10034 || ||||| | ||| || | || || ||| |||||||||||| ||||| || || Sbjct 16153 AAAAAGTTAGTCTTTCCTTGCAGAGAGATGTTCTCCATGAAGTCGAAGGGATTTGTCGCA 16212 Query 10035 CCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTAC 10094 | ||||| || ||||| || | | ||||| || || ||||||||||| Sbjct 16213 TTGTAGTGCTTCTCGTTGCCGAGGGCGACCAGCAGTCGGTCGGCGACAAACTCGATGTAT 16272 Query 10095 TGGCTCATCAGGTCCGAGTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAG 10154 ||||||||||| | ||||||||| |||| || || | || || | ||| Sbjct 16273 TGGCTCATCAGACGGGCGTTCATGCCGATCAATGAACATGGCAGCGCATCAGTGAGGAAA 16332 Query 10155 TCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTG 10214 | | ||| ||| ||| ||||| | | ||||| | || || ||| || | Sbjct 16333 GCTTGCTCGATGGTGACAGCTTCGCCAATGATGCGCAAGACGACCTCAGGGTGTGGGCGC 16392 Query 10215 TTCTCGAGCTTCGAAT--ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGC 10272 |||| ||| | || | | || || |||| | ||| || |||||||| |||| Sbjct 16393 TTCTTGAGAT--GACTGAAGAGTAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCTCGGC 16450 Query 10273 TGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAA 10332 |||||| ||||||||| || || ||||||||||| || || || |||||||| | Sbjct 16451 TGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGA 16510 Query 10333 TGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCG 10390 ||| | || ||||| |||| |||||| ||||||||| | |||||| | || Sbjct 16511 TGGAGGCAAAGGACCCAGAGA--AGAAGATGCCCTCCACGGCGGCGAAGGCGATCAATCG 16568 Query 10391 CTCTGCGAAGG----AGCGGTCGCG-CGA---AAAGTATTTCGAGGCCCACGCTGCCTTC 10442 ||| || |||| |||| || || | | || ||||||| | ||||| Sbjct 16569 CTCAGCAAAGGTCGATTCGGTGTCGTTGATCCACCGCAT-----GGCCCACTCGGCCTTT 16623 Query 10443 TTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAGAGCTTGTTACGCTCGGT-CT---C 10498 | ||| ||||||| ||||| || || || |||| | ||| | || | || Sbjct 16624 TGCTTGACGACAGGGATGGTCTCCATGGCATCAAAGA----GGTACTCGCGTTGCTGAGG 16679 Query 10499 GTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTA 10558 ||| ||| | || | |||||| |||||| ||| ||| | | |||| | Sbjct 16680 GTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTCTCCGAGTGAATGTTCTCCATCAT 16739 Query 10559 CCCCTGGTAAGCGTAGAA-CATACGTGCCGAGGGGTCCGTG-ACTTCCTCGGCAAAGTTG 10616 |||| | ||||||| ||| || ||| | | | || || ||| ||| Sbjct 16740 GATCTGGAAGCCGTAGAAGCAT-CGAGCC-TCTGCTGCTTGCACCTCCGAACTAAACCGC 16797 Query 10617 TTGTTCAGGTTCTCCATCACCATGCCATC-GCTGCCTGCAAAGAAGCCGAGGATGTGCTT 10675 | | |||||||| | || || || || | || |||| |||||| |||||| ||| | Sbjct 16798 TCGACGAGGTTCTCGTTGACAATACCGTCTGATG-CTGCGAAGAAGGCGAGGACGTGGCT 16856 Query 10676 GATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAG 10735 ||| ||||| ||||||| ||||||| || | |||||| || |||| | || Sbjct 16857 GATAAAGTGACGCTCATTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAG 16916 Query 10736 CTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 | || |||||| | |||||||| | || | |||||||||||||| || Sbjct 16917 GTCGATCTCCTCAGCAGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTG 16967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921581088275920