Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2146 489 3e-133 seq2057 282 8e-71 >seq2146 Length=21837 Score = 489 bits (542), Expect = 3e-133 Identities = 1040/1539 (68%), Gaps = 25/1539 (2%) Strand=Plus/Minus Query 243909 CCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGA 243968 |||| || ||||||||| |||| | ||||||| || ||||| | |||||||||| | Sbjct 17213 CCCGGTCCGCGGCCATGTCAATGATGACCTTCTGCGAGATCTCCCAGACCGTCTTGTACA 17154 Query 243969 TGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGA 244028 | ||||| | || || | ||| | ||||| | |||||| || | |||| Sbjct 17153 GCGCCTTGATCCGGTCCGGAATCCCGGGCACATTCTGAATCGAGCCGCCATGCGCTATGA 17094 Query 244029 GCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCC-AGCGCCTCGACCAGGTGC 244087 | || | ||| | ||||||||||| ||| || | | ||| | || ||| | Sbjct 17093 TCCGGTTCTTCATCTGCTCGTTCCACAG-CCCTTGCTCGACGAGCTCGCGGAGCAGCCAC 17035 Query 244088 CTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGC 244147 ||| || || || ||||| || | |||||| ||||| ||| |||||||| || Sbjct 17034 GGGTTGACGACTTGGAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGCTCGTGTAA 16975 Query 244148 GGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGAC 244207 ||||| | || ||| || |||||| ||||| ||| || |||||||| || | Sbjct 16974 GGCTCAAAGCACTCGTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCATAGGTGCG 16915 Query 244208 ACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCC 244267 | || ||| ||||| | |||||| ||| | | ||| ||| ||||||| Sbjct 16914 AGCAACAGCGAGTTCCGAAGACCGTGCGAGGCAATGTTGCGCTTGATCTCAGCCCAGTCC 16855 Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327 || | | ||| || | | | | |||||||||||| |||| ||| |||||| Sbjct 16854 CAAA-GACCG-------CTGGGGGTA-ACGCCCCACATGTCGTACTGGAGCTCGCCCTTG 16804 Query 244328 CTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTC 244387 ||| | |||| ||||||||| ||| ||||| ||| || ||| |||| || | Sbjct 16803 CTGGCCGGGCAGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCAAGCTCGCA-CGA 16745 Query 244388 TCG-TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT 244446 ||| || || ||||||| ||||||||||||||||||| |||| | | ||||| Sbjct 16744 TCGCTCAAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTC 16685 Query 244447 GCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGAT 244506 | | | |||| | |||||| |||||||| ||||||| || || | || ||||| Sbjct 16684 GGGACTGTCAAAGGCGTAGCCCATGATCATGAATGCGTCGGCGAGACCGTTGACTCCGAT 16625 Query 244507 GCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCC 244566 ||||||||| | ||| ||| |||| || | |||| |||||||| ||||| |||| | Sbjct 16624 GCCGATGGGGCGGTGGCGCATGTTCGACTTCTTGGCCTCGGGCACAGGGTAGTAGTTCAC 16565 Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAA 244626 ||||| | |||||||||||||| || | | ||| ||| ||| || || Sbjct 16564 ATCGATGATCTTGTTGAGGTTGCCACAGACGACCTTGGTGACCTCGTGAAGCTTCTTGAA 16505 Query 244627 GTCGTAC-TCGTAGGGATCCTCGGCGA-TGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684 ||| || || | | | | | |||| | || || | ||| || || | Sbjct 16504 GTCATATGTCCTCGTGTTGGTTTGCGAGTCGTAATGGATGTAGG-TCGGC-AGAGCCATA 16447 Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 ||||| ||||||||||| || ||||| |||| | |||||| | ||||| ||||| Sbjct 16446 CTGGCAAGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGATCTCCGTGCAA 16387 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 |||||| | |||||||||||| |||| || || || |||||| |||| |||||| Sbjct 16386 AGGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCC 16327 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 ||||| |||||||| || || ||||| |||||| | || ||| || |||||| Sbjct 16326 TTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGGCGTACCAGAGC 16267 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924 | | |||||||||||| | |||||| ||||| |||||| ||| |||||| Sbjct 16266 TTCTGAGCCTTGACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTTCTCGTAGAGGGCC 16207 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTC 244984 ||||| || || |||| ||| | || ||||||||| || ||||||||||| | Sbjct 16206 TCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCACATGAGCGAC 16147 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 ||||| ||| | | ||| | || |||||| | |||||| ||||| ||||| | |||| Sbjct 16146 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAGGGCGTAGAAG 16087 Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104 || || | || | ||| ||| ||| ||||||||| || || | || || ||| Sbjct 16086 AGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 16027 Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164 ||||| |||||| ||||| ||||||| || | || || || ||||||||||| ||| Sbjct 16026 ACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTTGTTGCCACCC 15967 Query 245165 TGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT 245220 ||||| | | | |||||| |||||||| || || | || || |||||||| Sbjct 15966 TGGTCGA----CGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTT 15911 Query 245221 AGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT 245280 ||| ||||||||| || ||||| | ||| |||| | || | | ||| | Sbjct 15910 GGAGACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGAATGTTGAG 15851 Query 245281 GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCC 245340 || | || ||||| |||| ||| | |||||| |||||| |||||| ||||| Sbjct 15850 CCCGATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCGTAGATGCC 15791 Query 245341 CTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCT 245400 || ||| ||| |||||| ||| ||| |||||||| |||| |||||| ||||| | Sbjct 15790 ATCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGGTTGGGTGT 15731 Query 245401 GCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 | | ||||| || ||||| ||||||||| ||||| Sbjct 15730 TCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTA 15692 >seq2057 Length=22280 Score = 282 bits (312), Expect = 8e-71 Identities = 577/841 (69%), Gaps = 40/841 (5%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||| || |||||||| ||||| Sbjct 16973 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACTGCTGAGGAGATCGACCTT 16914 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA-----GTTT-TTCCTC 42413 ||||||||| | || |||||| || |||||| || || || || Sbjct 16913 TCCAAGGACATGCACGACTGGGACAACAAGTT---GAACGACAATGAGCGTCACTTTATC 16857 Query 42414 AAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACC 42473 | || | || ||||||||||| || || ||||| || ||||| |||||||| | | Sbjct 16856 AGCCACGTCCTCGCCTTCTTCGCAGCATCAGACGGTATTGTCAACGAGAACCTCGTCGAG 16797 Query 42474 AGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533 |||| | |||||||| ||||| || |||||||||||||||||||| Sbjct 16796 CGGTTTAGTTCGGAGGTGCAAGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAGATCATG 16737 Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGAT 42590 || |||||| | ||||| ||| ||| | ||||||| |||| ||||| | || Sbjct 16736 ATGGAGAACATTCACTCGGAGACATACTCT---CTGCTCATCGACACATACATTCGCGAC 16680 Query 42591 CCCGTCGAGCGTAACGGG-----CTGTTCAAGGCCATGGAGACGATGCCCTG-CATCAAG 42644 || || ||| |||| | || || | ||||||||||| || ||||| | ||||| Sbjct 16679 CC--TC-AGC--AACGCGAGTACCTCTTTGATGCCATGGAGACCAT-CCCTGTCGTCAAG 16626 Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGG 42704 | ||||| || ||||| | |||||| | |||| | || || | ||| | Sbjct 16625 CAAAAGGCCGAGTGGGCCATGCGGTGGATCAACGACACCGAATCGACCTTTGCTGAGCGA 16566 Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || | ||||| ||||||| ||||||||||||||||| || |||| |||||||||||| Sbjct 16565 TTGATCGCCTTCGCCGCCGTGGAGGGCATCTTCTTCTCTGGGTCCTTTGCCTCCATCTTC 16506 Query 42765 TGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823 ||||||||| || ||| || |||||||| ||||| ||||| ||||| ||||||||| | Sbjct 16505 TGGCTCAAGAAGCGCGGTCTC-ATGCCCGGCCTCACGTTCTCCAACGAGCTCATCAGCCG 16447 Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA 42883 |||||||| ||||| | |||||||| ||||| || ||| || || |||| | || Sbjct 16446 AGACGAGGGTCTGCACACCGACTTTGCGTGCCTACTCTTC---AGTCATCTCA---AGAA 16393 Query 42884 GCCCTCGAA---GGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGA 42940 || | | | ||| ||| | |||||| || || || |||||| | | Sbjct 16392 GCGCCCACACCCTGAGGTCGTCTTGCGCATCATTGGCGAAGCTGTCACCATCGAGCAAGC 16333 Query 42941 GTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAA 43000 |||||||| | ||||||| || || ||||||||||| | || ||| || | Sbjct 16332 TTTCCTCACTGATGCGCTGCCATGTTCATTGATCGGCATGAACGCCCGTCTGATGAGCCA 16273 Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC-AGCCGCCTCTACA 43059 |||||| ||| |||||||||| || ||| | | || | || | | ||||| Sbjct 16272 ATACATCGAGTTTGTCGCCGACCGACTGCTGGTCGCCCTCGGCAACGAGAAG-CACTACA 16214 Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119 | || | ||||||||||| |||||||||||||| || | || ||||| ||||||| Sbjct 16213 ATGCGACAAATCCCTTCGACTTCATGGAGAACATCTCTCTGCAAGGAAAGACTAACTTTT 16154 Query 43120 T 43120 | Sbjct 16153 T 16153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944296869995360