Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2146 208 9e-49 seq2057 132 6e-26 >seq2146 Length=21837 Score = 208 bits (230), Expect = 9e-49 Identities = 1117/1758 (64%), Gaps = 59/1758 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||| |||||||||| | ||||| ||||||| |||| | ||||| || Sbjct 17337 CGGAGGTAGTACGTCCCCGTCTTCAACCCCTTCTTCCAGCCATAGAAGTGCATGCTGGT- 17279 Query 113657 AACTTGGAGAGTGTTGGACT-TTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 || |||| | | | | | || || || ||||| ||||||||| || |||||| Sbjct 17278 AAGTTGGCCAAAGCTCGGCGCTTGCAGATGGATGTTCAGACTTTGGGACTGGCAGATGAA 17219 Query 113716 -GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTC 113774 ||| || || ||||| ||||| ||||| | ||||| | ||| ||||| || || Sbjct 17218 AGCGCCC-CGGTCCGCGGCCATGTCAATGATGACCTTCTGCGAGATCTCCCAGACCGTCT 17160 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACC---CG 113831 |||| || ||| || || || || | | ||| || || ||||| || || Sbjct 17159 TGTACAGCGCCTTGATCCGGTCCGGAATCCCGGGCACATTCTGAATCGAGCCGCCATGCG 17100 Query 113832 CCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 113891 | ||| | | | |||||| | || ||| || || || ||| || | Sbjct 17099 CTATGATCCGG---TTCTTCATCTGCTCGTTCCACAGCCCTTGCTCGACGAGCTCGCGGA 17043 Query 113892 CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 113951 || | ||||| || ||||| || || || || | || | ||| Sbjct 17042 GCAGCCACGGGTTGACGACTTGGAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGC 16983 Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011 ||||||| |||||||||||||| ||| |||| ||| || || ||||| || |||| Sbjct 16982 TCGTGTAAGGCTCAAAGCACTCGTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCA 16923 Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGT 114071 | ||||| | | || ||| || ||||| | |||| ||||| | Sbjct 16922 TAGGTGCGAGCAACAGCGAGTTCCGAAGACCGTGCGAGGCAATGTTGCGCTTGATCTCAG 16863 Query 114072 CCCAGTCGTAGTTGA--GCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 114129 ||||||| | || ||| | | | | |||||| || ||||||| || | Sbjct 16862 CCCAGTCCCAAA-GACCGCTGGGGGTAACGCC-CCACATGTCGTACTGGAGCTCGCCCTT 16805 Query 114130 GGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC---GCCAATTCGGA 114186 | ||| || | ||||| |||||||||| || || | | |||| || | ||| | Sbjct 16804 GCTGGCCGGGCAGCCCTCGTATGTCTCGTA--GGTCC-CGAGCTCCTTGGCAAGCTCGCA 16748 Query 114187 -GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 114245 | |||| || || || ||||| || || ||||| || || || || | ||||| Sbjct 16747 CGATCGC-TCAAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGG 16689 Query 114246 CCTCGTCGGAAT--CAAACGCG-AGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGG 114301 ||||| ||| | |||| ||| || | || | || ||| | || |||||||| | | Sbjct 16688 CCTCG--GGACTGTCAAAGGCGTAGCC--CATGATCATGAATGCGTCGGCGAGACCGTTG 16633 Query 114302 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGA 114358 || |||| ||| || ||||| || | ||| || ||||| || ||| ||| || Sbjct 16632 ACTCCGATGCCGATGGGGCGGTGGCGCATGTTCGACTTCTTGGC---CTCGGGCACAGGG 16576 Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 114418 || | ||| |||||| | | | || || || ||| ||||| |||| || ||| Sbjct 16575 TAGTAGTTCACATCGATGATCTTGTTGAGGTTGCCACAGACGACCTTGGTGACCTCGTGA 16516 Query 114419 AGCTTTTCGTAATCAAAACT--------------GCGAGTCTCTTCATTGACATACTTAG 114464 ||||| | | | ||| | | ||||||| | || || || | | Sbjct 16515 AGCTTCTTGAAGTCATATGTCCTCGTGTTGGTTTGCGAGTCG--TAATGGATGTAGGTCG 16458 Query 114465 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 114524 | || || || || || || || |||| | ||| ||| | | |||||||||| | Sbjct 16457 GCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGA 16398 Query 114525 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 114584 | ||||| || | || || |||| |||||||| | |||||| || || ||||| || Sbjct 16397 TCTCCGTGCAAAGGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGT 16338 Query 114585 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 114644 | || ||||||||||||||| | || | || |||||||| |||| || |||| | Sbjct 16337 TGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGG 16278 Query 114645 CCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 114703 | | ||||| | || | | || | || ||| | || || ||||| ||||||||| Sbjct 16277 CGTACCAGAGCTTCTGAGCCTTG-ACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTTC 16219 Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 114763 ||||||||| || || || ||||| | | || | || || || || | | ||| Sbjct 16218 TCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGG 16159 Query 114764 CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823 || | ||| ||||| | || || || || ||||||||||| | ||| || ||||| Sbjct 16158 CACATGAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAA 16099 Query 114824 AGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 || || ||||||| || || |||| | || || | || || || | | || Sbjct 16098 AGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 16039 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG- 114942 | || || | || |||| |||||| || || | ||| | || | | |||| || Sbjct 16038 AGGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGC 15979 Query 114943 --ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000 ||| |||||| || || | || ||| || || || |||||||| |||| Sbjct 15978 TTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACA 15919 Query 115001 ATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGG 115060 || || | || ||| || || || ||| ||| || ||| || || Sbjct 15918 ATGCCGTTGGAGACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGA 15859 Query 115061 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 115120 |||| | || || || || ||| ||| ||| ||||| | |||| || || Sbjct 15858 ATGTTGAGCCCGATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCG 15799 Query 115121 TAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGC 115180 ||||| || ||||| |||||| |||| | | || ||||||||| ||||| || || Sbjct 15798 TAGATGCCATCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGG 15739 Query 115181 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 115239 | ||||| || || ||||||||||| || | |||||| |||| ||| | | ||||| Sbjct 15738 TTGGGTGTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAA-GTACTTCTCCGACAT 15680 Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | ||| || || | | | | |||||| ||||||||| |||| | ||| || Sbjct 15679 GAGGTTGTAAGTGTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCG 15620 Query 115300 CATAAACATGTATTGGGG 115317 ||| | ||| | ||| || Sbjct 15619 CATGAGCATATGTTGCGG 15602 >seq2057 Length=22280 Score = 132 bits (146), Expect = 6e-26 Identities = 190/261 (73%), Gaps = 10/261 (4%) Strand=Plus/Plus Query 126033 TGAAGAGTTC-CACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTC 126091 |||||||| |||| |||| || ||| ||||||||||| ||| |||||| || || Sbjct 16406 TGAAGAGTAGGCACG-CAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTG 16464 Query 126092 GAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAA 126151 ||||| || || ||||||||||| |||||||| | |||||| || | ||| || Sbjct 16465 GAGAACGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAC 16524 Query 126152 CCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGC 126211 || ||||||||||| |||||||| ||||| || | | ||||||||||||| | Sbjct 16525 CCAGAGAAGAAGATGCCCTCCACGGCGGCGAAGGCGATCAATCGCTCAGCAAAGG---TC 16581 Query 126212 GACTTTGTGTC---AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGA-TACACGGGAC 126267 || | ||||| | |||| ||| ||||||| ||||||| || || ||| |||| Sbjct 16582 GATTCGGTGTCGTTGATCCACCGCATGGCCCACTCGGCCTTTTGCTTGACGACA-GGGAT 16640 Query 126268 GGTCTGGATCGCTTCAAAGAG 126288 ||||| || || |||||||| Sbjct 16641 GGTCTCCATGGCATCAAAGAG 16661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597326823624880