Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2146 217 2e-51 seq2057 125 9e-24 >seq2146 Length=21837 Score = 217 bits (240), Expect = 2e-51 Identities = 1123/1758 (64%), Gaps = 59/1758 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||| |||||||||| | ||||| ||||||| |||| | ||||| || Sbjct 17337 CGGAGGTAGTACGTCCCCGTCTTCAACCCCTTCTTCCAGCCATAGAAGTGCATGCTGGT- 17279 Query 115618 AACTTGGAGAGTGTTGGACT-TTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676 || |||| | | | | | || || || ||||| ||||||||| || |||||| Sbjct 17278 AAGTTGGCCAAAGCTCGGCGCTTGCAGATGGATGTTCAGACTTTGGGACTGGCAGATGAA 17219 Query 115677 -GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTC 115735 ||| ||||| ||||| ||||| ||||| | ||||| | ||| ||||| || || Sbjct 17218 AGCG-CCCCGGTCCGCGGCCATGTCAATGATGACCTTCTGCGAGATCTCCCAGACCGTCT 17160 Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACC-TGCC 115794 |||| || ||| || || || || | | ||| || || ||||| || ||| Sbjct 17159 TGTACAGCGCCTTGATCCGGTCCGGAATCCCGGGCACATTCTGAATCGAGCCGCCATGCG 17100 Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACG 115854 | | || | | |||||| | || ||| || || || ||| || | Sbjct 17099 CT-ATGATCCGGTTCTTCATCTGCTCGTTCCACAGCCCTTGCTCGACGAGCTCGCGGAGC 17041 Query 115855 AGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTC 115914 || | ||||| || ||||| || || || || | || | |||| || Sbjct 17040 AGCCACGGGTTGACGACTTGGAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGCTC 16981 Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||| |||||||||||||| ||| |||| ||| || || ||||| || ||||| Sbjct 16980 GTGTAAGGCTCAAAGCACTCGTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCATA 16921 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 ||||| | | || ||| || ||||| | |||| ||||| | || Sbjct 16920 GGTGCGAGCAACAGCGAGTTCCGAAGACCGTGCGAGGCAATGTTGCGCTTGATCTCAGCC 16861 Query 116035 CAGTCGTAGTTGA--GCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGG 116092 ||||| | || ||| | | | | ||||||| || ||||||| || | | Sbjct 16860 CAGTCCCAAA-GACCGCTGGGGGTAACGC-CCCACATGTCGTACTGGAGCTCGCCCTTGC 16803 Query 116093 ACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC---GCCAATTCGGA-G 116148 || || | ||||| ||||||| || || || | | |||| || | ||| | | Sbjct 16802 TGGCCGGGCAGCCCTCGTATGTCTCGTA--GGTCC-CGAGCTCCTTGGCAAGCTCGCACG 16746 Query 116149 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 116208 |||| || || || ||||| || || ||||| || || || || | ||||||| Sbjct 16745 ATCGC-TCAAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCC 16687 Query 116209 TCGTCGGAAT--CAAACGCG-AGACGGCACAAA-ATAAATACATCCGCGAGACCTTGGAC 116264 ||| ||| | |||| ||| || | || | || ||| | || |||||||| | ||| Sbjct 16686 TCG--GGACTGTCAAAGGCGTAGCC--CATGATCATGAATGCGTCGGCGAGACCGTTGAC 16631 Query 116265 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATA 116321 |||| ||| || ||||| || | ||| || ||||| || ||| ||| || || Sbjct 16630 TCCGATGCCGATGGGGCGGTGGCGCATGTTCGACTTCTTGGC---CTCGGGCACAGGGTA 16574 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 | ||| |||||| | | | || || || ||| ||||| |||| || ||||| Sbjct 16573 GTAGTTCACATCGATGATCTTGTTGAGGTTGCCACAGACGACCTTGGTGACCTCGTGAAG 16514 Query 116382 CTTTTCGTAATCAAAACT--------------GCGAGTCTCTTCATTGACATACTTAGGA 116427 ||| | | | ||| | | ||||||| | || || || | || Sbjct 16513 CTTCTTGAAGTCATATGTCCTCGTGTTGGTTTGCGAGTCG--TAATGGATGTAGGTCGGC 16456 Query 116428 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 116487 || || || || || || || |||| | ||| ||| | | |||||||||| || Sbjct 16455 AGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGATC 16396 Query 116488 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 116547 ||||| || | || || |||| |||||||| | |||||| || || ||||| ||| Sbjct 16395 TCCGTGCAAAGGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTG 16336 Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607 || |||||||| ||||| | || | || |||||||| |||| || |||| || Sbjct 16335 GCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGGCG 16276 Query 116608 TTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 | ||| | | || | | || | || ||| | || || ||||| ||||||||| Sbjct 16275 TACCAGAGCTTCTGAGCCTTG-ACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTTCTC 16217 Query 116667 GTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGAC 116725 |||||||||||| || || ||||| | || | || | || || || || | | || | Sbjct 16216 GTAGAGGGCCTCGAATTCCTCACC-ATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGC 16158 Query 116726 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 116785 | | ||| ||||| | || || || || ||||||||||| | ||| || ||||| | Sbjct 16157 ACATGAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAA 16098 Query 116786 GCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 116845 | || ||||||| || || |||| | || || | || || || | | || | Sbjct 16097 GGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGA 16038 Query 116846 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC--TTGC- 116902 || || | || |||| |||||| || || | ||| | || | | |||| | || Sbjct 16037 GGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCT 15978 Query 116903 -GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATG 116961 | | ||| |||||| || || | || || ||| || || |||||||| |||| Sbjct 15977 TGTTG-CCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACA 15919 Query 116962 ATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGG 117021 || || | || ||| || || || ||| ||| | || ||| || ||| Sbjct 15918 ATGCCGTTGGAGACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGA 15859 Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081 |||| | || || || || ||| ||| ||| ||||| | |||| || || Sbjct 15858 ATGTTGAGCCCGATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCG 15799 Query 117082 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGC 117141 ||||| |||||||| |||||| |||| | | || ||||||||| ||||| || || Sbjct 15798 TAGATGCCATCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGG 15739 Query 117142 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 117200 | ||||| || || ||||||||||| || | |||||| |||| ||| | | ||||| Sbjct 15738 TTGGGTGTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAA-GTACTTCTCCGACAT 15680 Query 117201 CTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCG 117260 | ||| || || | | | | |||||| ||||||||| |||| | ||| || Sbjct 15679 GAGGTTGTAAGTGTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCG 15620 Query 117261 CATAAACATGTATTGGGG 117278 ||| | ||| | ||| || Sbjct 15619 CATGAGCATATGTTGCGG 15602 >seq2057 Length=22280 Score = 125 bits (138), Expect = 9e-24 Identities = 188/259 (73%), Gaps = 6/259 (2%) Strand=Plus/Plus Query 127506 TGAAGAGTTC-CACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTC 127564 |||||||| ||| ||||| || ||| ||||||||||| ||| |||||| || || Sbjct 16406 TGAAGAGTAGGCAC-GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTG 16464 Query 127565 GAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAG 127624 ||||| || || ||||||||||| |||||||| | |||||| || | ||| || Sbjct 16465 GAGAACGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAC 16524 Query 127625 CCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGG 127684 |||||||||||||| |||||||| ||||| || | | ||||| ||||||| || Sbjct 16525 CCAGAGAAGAAGATGCCCTCCACGGCGGCGAAGGCGATCAATCGCTCAGCAAAGG-TCGA 16583 Query 127685 GACTTTGT-ATCAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGA-TACATGGGACGG 127742 | ||| | | |||| ||| ||||||| ||||||| || || ||| |||| || Sbjct 16584 TTCGGTGTCGTTGATCCACCGCATGGCCCACTCGGCCTTTTGCTTGACGACA-GGGATGG 16642 Query 127743 TCTGGATCGCTTCAAAGAG 127761 ||| || || |||||||| Sbjct 16643 TCTCCATGGCATCAAAGAG 16661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613479699539760