Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2146 163 5e-35 seq2057 127 3e-24 >seq2146 Length=21837 Score = 163 bits (180), Expect = 5e-35 Identities = 451/681 (66%), Gaps = 14/681 (2%) Strand=Plus/Minus Query 203846 ACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTT 203905 ||||||||||| || || || | ||||||| | | | || |||||| | || ||||| Sbjct 17373 ACCGTGAACTGGATCGCATTGGCCGCAGGCCGGGTCCGGAGGTAGTACGTCCCCGTCTTC 17314 Query 203906 AGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCC 203965 | ||||||| ||| || || | ||||||| | |||| || | | | || | | Sbjct 17313 AACCCCTTCTTCCAGCCATAGAAGTGCATGCTGGTAAGTTGGCCAAAGCTCGGCGCTTGC 17254 Query 203966 ATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTG 204025 | || ||||||||| ||| ||| |||||||| |||| || |||||||| | Sbjct 17253 AGATGGATGTTCAGACTTTGGGACTGGCAGATGAAAGCGCCCCGGTCCGCGGCCATGTCA 17194 Query 204026 ATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGAGG 204084 || ||| ||||||||| |||||||| ||||||||| ||| || || || | | | || Sbjct 17193 ATGATGACCTTCTGCGAGATCTCCCAGACCGTCTTGTACAGCGCCT-TGATCCGGTCCGG 17135 Query 204085 CACATCTTCC---CACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCT 204140 | | || ||| | ||| ||||||||| | || || | | || || ||| Sbjct 17134 AA----TCCCGGGCACATTCTGAATCGAGCCGCCATGCGCTATGATCCGGTTCTTCATCT 17079 Query 204141 CCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 ||| ||||| |||| || || ||||| || | ||| ||||||| || || Sbjct 17078 GCTCGTTCCACA-GCCCTTGCTCGACGAGCTCGCGGAGCAGCCACGGGTTGACGACTTGG 17020 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || || || | |||||| | |||||| |||||||| | ||| | || || || |||| Sbjct 17019 AACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGCTCGTGTAAGGCTCAAAGCACTCG 16960 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 ||| ||| | |||||| || |||||| ||||| || || || | ||| ||||| Sbjct 16959 TTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCATAGGTGCGAGCAACAGCGAGTTC 16900 Query 204320 CGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGT 204379 || | ||||| | ||||||| | | |||||| | | ||||| Sbjct 16899 CGAAGACCGTGCGAGGCAATGTTGCGCTTGATCTCAGCCCAGTCCCAAAGACCGCTGGGG 16840 Query 204380 TTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTC 204439 | ||||||||||||||| |||| | ||| | ||| | |||| ||||| ||| ||| Sbjct 16839 GTAACGCCCCACATGTCGTACTGGAGCTCGCCCTTGCTGGCCGGGCAGCCCTCGTATGTC 16780 Query 204440 GGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATG-GCGTGATAGTACAT 204498 || | | ||| | || |||| |||||| || || | ||| | ||| || Sbjct 16779 TCGTAGGTCCCGAGCTCCTTGGCAAGCTCGCACGA-TCGCTCAAGAGCGGCGTGGTAGAT 16721 Query 204499 GGTCTCAAAGATCTGAACGTT 204519 |||||| |||||||||| ||| Sbjct 16720 GGTCTCGAAGATCTGAATGTT 16700 Score = 118 bits (130), Expect = 2e-21 Identities = 473/730 (65%), Gaps = 20/730 (3%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||| | |||||| ||||| | |||| | ||| | || | | || |||||| || Sbjct 16405 CTCTATGATCTCCGTGCAAAGGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGA 16346 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 ||||||||| | ||||||||| | |||||| || | || ||||| |||| | Sbjct 16345 CTTGCGGTTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTC 16286 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACT-TGCTTCACGTACATCCCTTGAGACT 205061 ||||| | | ||| | | |||||| || ||| | | || |||| | | || Sbjct 16285 CAGAACGGCGTACCAGAGCTTCTGAGCCTTGACCGTGCGGCGAGCACGACCCTCGCG-CT 16227 Query 205062 CGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATT 205121 |||| || ||| || ||| | || || ||| || ||||| || || || || | Sbjct 16226 CGTACTTCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACT 16167 Query 205122 TTTTGGGACACATCAGAGACCACA-TCTGATCGTCTTTCACCCTCTCCATAAACAGGTCG 205180 ||| ||||| || |||||| || | || | || || | || ||| |||| |||| Sbjct 16166 CAGCGGGGCACATGAGCGACCACTCTCCGTTC-TGTTCGACTCGCTTCATGAACAAGTCG 16108 Query 205181 CTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTT 205240 ||||| ||| |||| || || |||||||| | || | || | || ||||||| Sbjct 16107 GGAATCCAAAGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTC 16048 Query 205241 TTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGC 205299 | | ||| || || || | | ||| | |||||| ||||| | | | ||| | || Sbjct 16047 CTGAGGTCGAGG-AACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGC 15989 Query 205300 GCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAG 205359 || || | |||||| ||||||||||| || ||||| | |||||| ||||| || Sbjct 15988 CCCCGGTCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAG 15929 Query 205360 CATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCT 205419 ||| || || | ||||||| | ||||| || | ||| ||||| ||| Sbjct 15928 CATGGGAACAATGCCGTTGGAGACGCCGTTGGTTCCAGCAATGTAAGAGCC--GGTGCCT 15871 Query 205420 CACGTTGGAG---ATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC-ACT 205475 | | || || ||| || || || || | |||| |||| ||||| | | Sbjct 15870 C-GGATGCAGTGAATGTTGAGCCCGATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGT 15812 Query 205476 CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACG 205535 |||| || ||| ||||||||| ||||||| || ||| || || ||||| |||| | Sbjct 15811 CTTG-AGGGTGTCGTAGATGCCATCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGG 15753 Query 205536 AAGCCAGCTTGGCAAAGTTG---GTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGA 205592 | | || || || |||| || || || | |||||| ||||| ||||||| ||| Sbjct 15752 ATGACATCTGGG---GGTTGGGTGTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGA 15696 Query 205593 AGCGCTTCTC 205602 || |||||| Sbjct 15695 AGTACTTCTC 15686 >seq2057 Length=22280 Score = 127 bits (140), Expect = 3e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || ||||||||||||||| |||||| |||||||| || ||||| ||||||||| Sbjct 16408 AAGAGTAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAG 16467 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | ||||||| ||||||| || ||| |||||||| || |||| ||||| | || Sbjct 16468 AACGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGACCCA 16527 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| ||||||||||| || || || | | | |||| |||| | | | | Sbjct 16528 GAGAAGAAGATGCCCTCCACGGCGGCGAAGGCGATCAATCGCTCAGCAAAGGTCGATTCG 16587 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTT 160128 ||||| | | |||||| ||||||| || ||||| Sbjct 16588 GTGTCGTTGATCCACCGCATGGCCCACTCGGCCTT 16622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795119557168160