Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2057 352 3e-92 seq1890 143 3e-29 seq3431 138 1e-27 seq1114 132 5e-26 seq2921 131 2e-25 >seq2057 Length=22280 Score = 352 bits (390), Expect = 3e-92 Identities = 584/829 (70%), Gaps = 28/829 (3%) Strand=Plus/Plus Query 132627 CTCaaaaaaa-TTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGG 132685 |||| ||||| ||||| ||||| | || || ||| | ||| || || ||||| || | Sbjct 16148 CTCACAAAAAGTTAGTCTTTCCTTGCAGAGAGATGTTCTCCATGAAGTCGAAGGGATTTG 16207 Query 132686 CTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACT 132742 | ||||||||||| | |||||| || |||| ||||| | |||||| || |||| Sbjct 16208 TCGCATTGTAGTGCTTCTCGTTGCCGA---GGGCGACCAGCAGTCGGTCGGCGACAAACT 16264 Query 132743 CGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCG 132801 |||||||||| ||| | || | || | || | | || |||||||| || Sbjct 16265 CGATGTATTGGCTCATCAGACGGGCGTTCATGCCGATCA-ATGAACATGGCAGCGCATCA 16323 Query 132802 GTGAG-AAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 ||||| ||||| ||||||||||| ||| || ||| | ||| | ||| | | | Sbjct 16324 GTGAGGAAAGC-TTGCTCGATGGTGACAGCTTCGCCAATGATGCGCAAGACGACCTCAGG 16382 Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 | || || | | | ||| |||| | | ||| ||||||||| |||| ||||| Sbjct 16383 GTGTGGGCGCTTCTTGAGATGACTGAAGAGTAGGCACGCAAAGTCGGTGTGCAGACCCTC 16442 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| | | ||||| |||||| ||| || | |||||||||||| ||||| || ||||| Sbjct 16443 GTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGACCGCGCTTCTTGAG 16502 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| ||| || || || ||||||| |||||| ||||| ||||| || | Sbjct 16503 CCAGAAGATGGAGGCAAAGGACCCAGAGAAGAAGATGCCCTCCACGGCGGCGAAGGCGAT 16562 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 || ||||| | || || | ||| || | |||||| |||| ||||| |||||||| Sbjct 16563 CAATCGCTCAGCAAAGGTCGATTCGGTGTCGTTGATCCACCGCATGGCCCACTCGGCCTT 16622 Query 133101 TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTC----TTCCG 133156 || |||||| || || || || |||| || |||| ||| | ||| | | | Sbjct 16623 TTGCTTGACGACAGGGATGGTCTCCATGG----CATCAAA--GAGGTACTCGCGTTGCTG 16676 Query 133157 AGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCAT 133214 ||| ||| | ||| ||||||||||| || || | |||||||| | ||||||||| Sbjct 16677 AGGGTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTCTCCGAGTGAATGTTCTCCAT 16736 Query 133215 GGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-C 133273 ||| || |||||||| ||||| || ||||| | | ||||| || || | ||| | Sbjct 16737 CATGATCTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCTTGCACCTC-CGAACTAAACC 16795 Query 133274 GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333 ||||||| || || |||||||| || ||||| || ||||| ||||| || ||||| Sbjct 16796 GCTCGACGAGGTTCTCGTTGACAATACCGTCTGATGCTGCGAAGAAGGCGAGGACGTGGC 16855 Query 133334 TGATGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACA 133390 |||| || || ||||| ||||||||||| | ||||||||| || |||||||||| | Sbjct 16856 TGATAAAGTGACGCTCATTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAA 16915 Query 133391 GGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||| | |||||| | ||||| ||||| ||||| || || |||||||| Sbjct 16916 GGTCGATCTCCTCAGCAGTCCAGAACGATGCCTCTGCCTTCTTGTACAT 16964 >seq1890 Length=49107 Score = 143 bits (158), Expect = 3e-29 Identities = 164/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| ||||||||| |||| |||||| | | Sbjct 42029 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCA 41970 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| ||| |||| ||||| ||||| ||||| | |||| Sbjct 41969 GACACCATTGACAATG--TCAAGACAAAGATCCAGGACAAGGAGGGCATTCCGCCGGACC 41912 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || ||||| | ||| || || ||||| || |||| ||||| ||| |||||||| Sbjct 41911 AACAACGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACA 41852 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| |||| || || ||||| || || Sbjct 41851 ACATCCAGAAGGAGTCGACACTCCACTTGGTCCTTCG 41815 Score = 136 bits (150), Expect = 4e-27 Identities = 171/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| |||| || || | | Sbjct 46304 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCATCG 46363 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| |||||| || |||| ||||| ||||| |||||| | |||| Sbjct 46364 GACACAATCGACAACG--TAAAGACGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACC 46421 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | ||| ||||| || || || |||| ||||||||| ||||||| Sbjct 46422 AACAGCGCCTCATCTTCGCAGGCAAGCAACTTGAGGACGGCCGCACCCTCTCTGACTACA 46481 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||| || ||||| | || || || |||||||| ||| | | || |||| Sbjct 46482 ACATTCAGAAGGAGTCCACACTCCACTTGGTGCTCCGTCTCCGCGGTGGCC 46532 Score = 132 bits (146), Expect = 5e-26 Identities = 170/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| ||||||||| |||| || || | | Sbjct 41801 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCTTCA 41742 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| ||| |||| ||||| ||||| |||||| | |||| Sbjct 41741 GACACCATCGACAATG--TCAAGACAAAGATCCAGGACAAGGAGGGCATTCCCCCGGACC 41684 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | || | || ||||| ||||| || |||| || || || ||||||| Sbjct 41683 AACAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTTTCGGACTACA 41624 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||||||||| |||| || || ||||| |||||| | | || |||| Sbjct 41623 ACATCCAAAAGGAGTCGACACTCCACTTGGTCCTGCGTCTCCGCGGTGGCC 41573 Score = 127 bits (140), Expect = 2e-24 Identities = 154/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || || || ||||| ||||||||| |||| |||||| || | || | | | | Sbjct 42246 CGTTAAGACTCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCAGATACCATCGA 42187 Query 38315 -AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 |||| | |||| || |||| ||||| ||||| || || | ||||||||||| ||| Sbjct 42186 CAACG--TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTC 42129 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || ||||| || || | |||||||| ||||||||||||||||||| Sbjct 42128 ATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTTTCCGACTACAACATCCAAAAG 42069 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458 || |||| || || ||||| || || Sbjct 42068 GAGTCGACCCTCCACTTGGTCCTTCG 42043 Score = 120 bits (132), Expect = 3e-22 Identities = 153/207 (74%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || || || ||||| ||||| ||| |||| |||||| || | |||| | | | Sbjct 46087 CGTTAAGACTCTTACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCAGACACCATCGA 46146 Query 38315 -AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 || | | |||| || |||| ||||| ||||| ||||| | |||||||| || || Sbjct 46147 CAATG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAACGTCTG 46204 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||||| || |||| ||||| ||| ||||||||||||||||||| Sbjct 46205 ATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACAACATCCAAAAG 46264 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGT 38459 || | || || || ||||| || ||| Sbjct 46265 GAGTCCACTCTCCACTTGGTCCTCCGT 46291 >seq3431 Length=10244 Score = 138 bits (152), Expect = 1e-27 Identities = 167/221 (76%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| ||||| || |||||| |||| || ||| || Sbjct 1325 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCC 1266 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCG 38358 |||||| | | | |||| | |||| || |||| ||||| ||||| || ||| | | Sbjct 1265 TCCGACACCATCGACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGGATCCCCCCGG 1208 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||||||||| | || || |||||||| || |||| || || || | ||||| Sbjct 1207 ACCAGCAGCGGCTCATCTTTGCCGGAAAACAGCTCGAGGACGGACGGACGCTGAGCGACT 1148 Query 38419 ACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||| ||||| ||| || || ||| |||| || || Sbjct 1147 ACAACATCCAGAAGGAGAGC-ACCCTTCATCTGGTCCTTCG 1108 >seq1114 Length=26360 Score = 132 bits (146), Expect = 5e-26 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| || |||||| |||| || ||| | || Sbjct 18967 ATGCAGATCTTTGTGAAGACTCTCACAGGCAAGACGATCACCCTCGAGGTGGAGTCATCC 18908 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | |||| || |||| ||||| ||||| || || | |||| Sbjct 18907 GACACGATTGACAACG--TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACC 18850 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | || ||||| ||||| || |||| || || || ||||||| Sbjct 18849 AACAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTGTCGGACTACA 18790 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| |||||| |||| ||||| | || |||||| || | ||||| Sbjct 18789 ACATCCAGAAGGAATCGACCCTGCACCTCGTCCTGCGTCTGCGCGGCGG 18741 >seq2921 Length=71014 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || |||||| |||| || ||| | || Sbjct 18333 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 18274 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || |||| ||||| |||||||| ||| | ||||| Sbjct 18273 GACA-CGATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCA 18215 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| ||||| || |||||||| Sbjct 18214 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAA 18155 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || || | ||||| || Sbjct 18154 CATCCAGAAGGAGTCGACCCTCCACCTCGTGCTTCG 18119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500150379754240