Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1890 87.8 7e-12 >seq1890 Length=49107 Score = 87.8 bits (96), Expect = 7e-12 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || || || || ||||||||||| Sbjct 46304 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCATCG 46363 Query 391110 GATAACATTGA-AGCTATTAAACA-AAAAATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167 || | || || | | |||| | || || ||||| ||||| || ||||| || || | Sbjct 46364 GACACAATCGACAAC--GTAAAGACGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACC 46421 Query 391168 AACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATA 391227 |||| || | || ||| |||| || |||||||| || || | || | | || || | Sbjct 46422 AACAGCGCCTCATCTTCGCAGGCAAGCAACTTGAGGACGGCCGCACCCTCTCTGACTACA 46481 Query 391228 ATATTGATAAGGATGCAACACTTCACTTAGT 391258 | ||| | ||||| | ||||| ||||| || Sbjct 46482 ACATTCAGAAGGAGTCCACACTCCACTTGGT 46512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975627624383288