Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2112 430 2e-115 seq3096 141 1e-28 >seq2112 Length=48576 Score = 430 bits (476), Expect = 2e-115 Identities = 764/1105 (69%), Gaps = 16/1105 (1%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| ||||| ||||| |||||||| || | || || Sbjct 20116 ATGGCGGCCTGGACGGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTGATGGACTTGTTG 20057 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || |||||| || | || | | | |||| ||||| || || || Sbjct 20056 GGCTCGCGACCGTTGAAGAAGTCGCGGAGGAGCTTCTGAACACGGGGGATACGCGTGGAG 19997 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 ||||||||||| ||||| || || || | || || ||||| ||||| || || Sbjct 19996 CCACCGACCAAGACGATCTCGTTGACGGAGGCCTTGTCTATCTTGGAGTCGCGGAGCACC 19937 Query 7202 TTTTCGACAGGTTCCATACATTTACG-GAACAAGTCCATACACAGTTCCTCAAAACGTGC 7260 || ||||| || || || | | || ||| | ||| ||| || |||||||| || || Sbjct 19936 TTCTCGACGGGGTCGATGG-TGTGCGAGAAGAGGTCGCCACAGAGCTCCTCAAAGCGGGC 19878 Query 7261 ACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320 |||||||||||| || ||||| || | ||| ||| | | ||| || || || ||||| || Sbjct 19877 ACGGGTAATGGAGGTGTAGAAGTCGATGCCCTCGAAGAGCGAGTCGATCTCGATGGTGGT 19818 Query 7321 TTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380 || || | ||||| | || |||||||||||||| || ||||| | |||||| | Sbjct 19817 CTGGGCGGCGGAAGAAAGGGTACGCTTTGCGCGCTCGGCGGCGGTTCGGAGACGACGGAC 19758 Query 7381 GGCACGCG--GGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG 7438 ||| || | | | | || || || || || | || || || ||||| | |||| Sbjct 19757 GGCGCGAGCAGATGA--GGTGATGTCCTTTTTGTTCTTGCGCTTGAACTCCTGGACGAAG 19700 Query 7439 TGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498 || | ||| | ||||| || |||||||||||||| || || || ||||| || Sbjct 19699 TGGGTGACGAGACGGTTGTCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCC 19640 Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558 ||||| || ||||| || |||| ||| | | | ||| ||||| ||||| || || ||| Sbjct 19639 TTGACCTCGAAGATGCCCTCTTCGATGGTAAGGAGCGAGACATCGAACGTGCCTCCTCCC 19580 Query 7559 AGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATA 7618 | ||| || || || |||||| | ||| | || ||||| ||||||||||| || || Sbjct 19579 AAGTCGAAGATCAGGACGTTCTTCTCGCCCTCGCCCTTCTTGTCGAGACCGTAAGCAATG 19520 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGC 7677 || || || || || || || || || || | ||| ||| ||||||||||| || | || Sbjct 19519 GCGGCGGCGGTGGGCTCGTTGATGATGCGCATGAC-GTTGAGGCCAGCAATCGTACCGGC 19461 Query 7678 ATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737 || || || ||||| ||||| || ||||| ||||| || ||||| || ||||| ||||| Sbjct 19460 GTCCTTGGTGGCTTGGCGTTGAGAGTCGTTGAAGTAAGCAGGGACTGTGACGACGGCGTC 19401 Query 7738 CGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 | |||| | |||||| || | || ||| | || ||| ||| | || ||||| | Sbjct 19400 CTTGACGGTGCCACCGAGGTAGGCCTCGGCGGTCTCGCGCATCTTGATGAGGACCATGGC 19341 Query 7798 TGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGG 7857 || || || || | | || || || || || ||| || |||| || ||||| Sbjct 19340 AGAGATTTCCTCCGGGGTGAAAGTCTTGGTCTCTCCCTTAGCCTCGACTTGGATTATGGG 19281 Query 7858 TTTATCCGCAGCACCGG-GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCT 7916 || | || || ||||||||| | | ||| | ||||| ||| || || | Sbjct 19280 CTT----GGTGCCTTGGTCGATAACCTTGAAGGGCCAGTGCTTCATGTCGGACTGCACTT 19225 Query 7917 GTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGT 7976 ||| | ||||| | |||||| || ||||| || || || |||||||| | ||||| Sbjct 19224 CGCTGTCGGCGAACTTGCGTCCGATGAGCCGCTTGGCGTCGAAGACTGTGTTGTGGGGGT 19165 Query 7977 TCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACG 8036 ||||||| || ||||||||||| ||||| ||||| || || || | || || || | Sbjct 19164 TCATGGCGGTCTGGTTCTTCGCGGCGTCACCGATGAGGCGCTC---TGTGTCGGTGAAGG 19108 Query 8037 CGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGT 8096 |||| || || || || || || || || |||||||| || |||| || || ||||||| Sbjct 19107 CGACATATGAGGGTGTTGTCCGGTTGCCCTGGTCGTTGGCGATAACCTCGACCCGGTCGT 19048 Query 8097 TTTGCCAGACGCCGACGCACGAATA 8121 ||||||||||| |||| || || || Sbjct 19047 TTTGCCAGACGGCGACACAGGAGTA 19023 >seq3096 Length=14817 Score = 141 bits (156), Expect = 1e-28 Identities = 285/413 (69%), Gaps = 16/413 (4%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||||| | | ||| || | |||| | | | || || Sbjct 11085 TCCTCGAAACGGGCACGGGTGATGGAGGCCTGGAAGTCGATACCGTTGGAGAGAGAGTCG 11144 Query 7307 ATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 | || | ||| || || || | | || || ||||||||||||||||| ||||| | Sbjct 11145 ACCTCGACGGTGGTCTGGGTGACACTG--GACAATGTTCGCTTTGCGCGCTCGCACGCAG 11202 Query 7365 TTCGTAAACGACGAAGGGCACGCGG---GTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 || | |||||| | ||||||||| || |||| || || ||| | || || | Sbjct 11203 ACCGCAGACGACGGATGGCACGCGGGTCGTCACCG---ATCTCGACCTTGTTCTTGCGCT 11259 Query 7422 TAAACTCTTCAGAGAAGT-GTCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 |||||| | ||||| ||||| | | | | | ||||| || |||||||| | || Sbjct 11260 CAAACTCCTTCTTGAAGTGGTCGAGAAGGGCGTTG--TCGAAGTCCTCACCACCGAGATG 11317 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||| || ||||| | |||| ||| || |||||| | | || || Sbjct 11318 GGTGTCACCAGCGGTTGCCTTGACGGCGAAGACACCACCGGTAATGTTGAGAAGTGAGAC 11377 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-GTCGTCTTTGTTCT 7598 ||| ||||| || || |||||||| |||||||| |||||| | || |||| | || Sbjct 11378 ATCGAACGTGCCTCCTCCCAGGTCGAAAATGAGAACGTTCTTCTCGGTCGAC-GACTTGG 11436 Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 ||||||||||| || || || || || || || || || || ||||| ||| Sbjct 11437 AGTCGAGACCGTAAGCAATGGCGGCGGCAGTGGGCTCGTTGATGATACGGAGA 11489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635104330172240