Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2146 192 7e-44 seq2057 123 3e-23 >seq2146 Length=21837 Score = 192 bits (212), Expect = 7e-44 Identities = 898/1394 (64%), Gaps = 59/1394 (4%) Strand=Plus/Plus Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680 ||| ||||||| ||||| |||| || || ||| || ||||| | | || || Sbjct 15611 ATGCTCATGCGAGTCGCCGTCGGCATTCACGGGCGGGACATTGACCAGGCCATCGACACT 15670 Query 111681 TACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739 ||| || ||||| | ||| |||| |||||| | || ||||||||||| || || Sbjct 15671 TACAACCTCATGTCGGAGAAGTAC-TTCACCCACGCCTCGCCCACCCTCTTCAATGCCGG 15729 Query 111740 TACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAA 111799 ||||| | ||||| ||||| || ||||| | | | ||||| || || ||| | Sbjct 15730 AACACCCAACCCCCAGATGTCATCCTGCTTCCTGGTCACGATGAAGGATGACTCCATCGA 15789 Query 111800 TGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGG 111859 |||||| |||| ||| |||| || ||| ||| ||| ||| ||||| ||||| Sbjct 15790 TGGCATCTACGACACCCTCAAGACTTGCGCCATGATCAGCAAGACGGCCGGTGGCATCGG 15849 Query 111860 GATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATC 111919 | | |||| || || ||| || | ||| ||| || || || || || Sbjct 15850 GCTCAACATTCACTGCATCCGAGGCACCGGCTCTTACATTGCTGGAACCAACGGCGTCTC 15909 Query 111920 AGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGC 111979 | || ||| |||| |||||||| || || ||| ||| || ||||| || |||| | Sbjct 15910 CAACGGCATTGTTCCCATGCTTCGAGTCTTCAACAACACCGCTCGCTACGTCGACCAGGG 15969 Query 111980 TGGGCGTC--GCAA--GGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCA 112035 | ||| | || | ||| || | || |||| ||||||| |||||| |||| || Sbjct 15970 T-GGCAACAAGCGACCGGGGGCTTTTGCCATCTACATTGAGCCTTGGCACTCGGACGTCT 16028 Query 112036 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCT 112095 | |||||||| || | | ||||| || | ||||||| || ||| || |||| Sbjct 16029 TCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGTGAGCTCT 16088 Query 112096 TCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGT 112155 ||| ||| || |||||||| || | ||||||||| |||| || ||| || | |||| Sbjct 16089 TCTACGCCCTTTGGATTCCCGACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGT 16148 Query 112156 CTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAG 112215 | ||| | || || | || |||||||| |||| | | |||||||| || || | Sbjct 16149 CGCTCATGTGCCCCGCTGAGTGCCCCGGTCTTGCCGACGTCTATGGTGAGGAATTCGAGG 16208 Query 112216 CCCTCTACACAAAGTACGAGGAAGAAAGTCGGGC-GACTGCGACGGTGCCAGCTGCCGAT 112274 |||||||| ||||||||| || |||| || | || ||||| | || | || Sbjct 16209 CCCTCTACGAGAAGTACGAGCGCGAGGGTCGTGCTCGCCGC-ACGGT-CAAGGCTCAGAA 16266 Query 112275 G-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAA 112333 | | ||| | || |||| || | || || |||||||| | || | ||||||||||| Sbjct 16267 GCTCTGGTACGCCGTTCTGGAGGCCCAGACGGAGACTGGCAACCCTTTCATGCTTTACAA 16326 Query 112334 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCT 112393 ||||| |||| ||| || || ||||| | || ||||||| || ||||| Sbjct 16327 GGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCACCATCAAGAACTCTAACCT 16386 Query 112394 CTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 112453 || || || ||| | || | | | || ||| ||||| || ||||| || Sbjct 16387 TTGCACGGAGATCATAGAGTACAGCGCTCCGGACGAGGTCGCTGTCTGCAACCTTGCCAG 16446 Query 112454 AATCGCTCTCCC---------CAAGTATG--TGG--ATCCAGAGACAAAGACATTTGATT 112500 || ||||| || | | || | | | | ||| | || | ||||| ||| | Sbjct 16447 TATGGCTCTGCCGACCTACATCCATTACGACTCGCAAACCA-ACACGAGGACATATGACT 16505 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || || ||||| || || || ||| ||||| |||| | || ||| Sbjct 16506 TCAAGAAGCTTCACGAGGTCACCAAGGTCGTCTGTGGCAACCTCAACAAGATCATCGATG 16565 Query 112561 GAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || | ||||| || ||| || || || || ||| | ||||| || || | Sbjct 16566 TGAACTACTACCCTGTGCCCGAG---GCCAAGAAGTCGAACATGCGCCACCGCCCCATCG 16622 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCATTTG--AT 112673 | |||| ||| | |||||||| || | |||||| || | | || |||| |||| | Sbjct 16623 GCATCGGAGTCAACGGTCTCGCCGACGCATTCATGATCATGG--GCTACGCCTTTGACAG 16680 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733 ||| ||| || ||| | |||| | || || ||||| || || |||||||||||| Sbjct 16681 TCC--CGAGGCCAAGAAGCTCAACATTCAGATCTTCGAGACCATCTACCACGCCGCTCTT 16738 Query 112734 GAGGCGA--GTTCGGAGTTGGCA--GAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 || |||| || || ||| || ||| | | || || || || || | ||||| | Sbjct 16739 GA-GCGATCGTGCGAGCTTGCCAAGGAGCTCG--GGACC-TACGAGACATACGAGGGCTG 16794 Query 112790 TCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCA 112846 || || || |||||| | ||| || | || ||||||| || | || ||| || Sbjct 16795 CCCGGC--CAGCAAGGGCGAGCTCCAGTACGACATGTGGG-GCGTTACCCCCAGCGGTCT 16851 Query 112847 CTACGACTGGGACGCTCTCAAGGAACGCATCAAGG---AGAAGGGTCTTCGTAACAGTCT 112903 | ||||||| | ||||| |||| || | | | |||||||| ||| || Sbjct 16852 TTGGGACTGGGCTGAGATCAAG---CGCAACATTGCCTCGCACGGTCTTCGGAACTCGCT 16908 Query 112904 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963 ||| | ||||| ||||| || ||||| || || ||| |||| || || ||||| Sbjct 16909 GTTGCTCGCACCTATGCCGACGGCCTCGACGAGTCAGATCCTGGGCTTCAACGAGTGCTT 16968 Query 112964 TGAACCCTACACGA 112977 ||| || ||||||| Sbjct 16969 TGAGCCTTACACGA 16982 >seq2057 Length=22280 Score = 123 bits (136), Expect = 3e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||||||||||||| | |||| || || || ||||| |||||||||||||| |||| Sbjct 16579 CCTTTGCTGAGCGATTGATCGCCTTCGCCGCCGTGGAGGGCATCTTCTTCTCTGGGTCCT 16520 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 | | | || | |||||||||||||| ||||||||||| || ||| |||||||||| Sbjct 16519 TTGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACGTTCTCCAACG 16460 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 |||| ||| || |||||||| || ||| || |||||| Sbjct 16459 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCG 16419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620714575221920