Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2146 190 2e-43 seq2057 87.8 2e-12 >seq2146 Length=21837 Score = 190 bits (210), Expect = 2e-43 Identities = 604/927 (65%), Gaps = 11/927 (1%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| ||| ||||| ||||| |||| |||||| || |||| || | Sbjct 16458 GGCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATG 16399 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || ||||| || | ||| || |||| ||| || | ||||||||| ||||| ||| | Sbjct 16398 ATCTCCGTGCAAAGGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGG 16339 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||| || ||||| || |||||| | ||| | ||||| |||||||| | || |||| | Sbjct 16338 TTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACG 16279 Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 || | ||| | | || | | | | || || | ||| |||| || ||||||||| Sbjct 16278 GCGTACCAGAGCTTCTGAGCCTTG-ACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTT 16220 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 ||| | | |||| ||||||| || || || || | |||||| || |||| Sbjct 16219 CTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGG 16160 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 || | ||| ||||| | ||| || || || | ||||||||||| ||| |||||||| Sbjct 16159 GCACATGAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCA 16100 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 | || |||| || |||||| ||| |||| || | || ||||| | || || Sbjct 16099 AAGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTC 16040 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 | || || | || ||||||||||| || || | |||| || | | ||| || Sbjct 16039 GAGGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCG 15980 Query 110760 ---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAAT 110816 || |||||| || ||||| || ||| |||||||| | ||||| |||| Sbjct 15979 CTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAAC 15920 Query 110817 AATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTG 110876 ||| || | ||| || || || || ||| || || | || ||| ||| Sbjct 15919 AATGCCGTTGGAGACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTG 15860 Query 110877 GATATGCATACCAATACCACCCGCCCACTTACTAAT--TTGTGCACACTCTGTGAGTGTA 110934 || | | || || ||||| ||| ||| || || | | ||| | ||| |||| || Sbjct 15859 AATGTTGAGCCCGATGCCACCGGCCGTCTTGCTGATCATGGCGCA-AGTCT-TGAGGGTG 15802 Query 110935 CCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGA 110994 | || || ||||| || || || |||| | | | || ||||| || |||||||| Sbjct 15801 TCGTAGATGCCATCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGG 15742 Query 110995 GGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGA 111053 || || ||||| ||||||||||| || || | || || |||| || | | || Sbjct 15741 GGGTTGGGTGTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAA-GTACTTCTCCGA 15683 Query 111054 CATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAAC 111113 ||| |||||| ||||||| || | | || |||||||| || | ||| || Sbjct 15682 CATGAGGTTGTAAGTGTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGAC 15623 Query 111114 TCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACT 111173 |||||||| ||||| ||| ||| | ||| | ||| || | || ||| | || ||| Sbjct 15622 TCGCATGAGCATATGTTGCGGCCTCTCGGCGACCTTGCCGTTAATGCGCAGCAGATAAGA 15563 Query 111174 CTTCTCTAGGGTCTTGAGACCAAAGTA 111200 ||| || ||||||| || ||||| Sbjct 15562 GCGCTCGAGAGTCTTGAAGCCGAAGTA 15536 >seq2057 Length=22280 Score = 87.8 bits (96), Expect = 2e-12 Identities = 338/522 (65%), Gaps = 12/522 (2%) Strand=Plus/Plus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 ||||||||| || ||| || || |||||||| || | ||||| ||||| ||||| Sbjct 16452 GATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGAT 16511 Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTC 119647 || ||| ||||| ||||||||||||||||| |||||| |||| | ||||| Sbjct 16512 GGAGGCAAAGGACCCAGAGAAGAAGATGCCCTCCACGGCGGCGAAGGCGATCAATCGCTC 16571 Query 119648 AGCAAAAGGTCGA----GACTTGTCGAACCACTTGAGAGCCCAGTTGGCCTTACGCTCTA 119703 ||| ||||||||| | | || || |||| | ||||| | |||||| ||| | Sbjct 16572 AGC-AAAGGTCGATTCGGTGTCGTTGATCCACCGCATGGCCCACTCGGCCTTTTGCTTGA 16630 Query 119704 TGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCT-TCTTTTCAGCACCATCCTTAATA 119762 | |||| || | ||||| || || || | || | || | | | || ||| Sbjct 16631 CGACAGGGATGGTCTCCATGGCATCAAAGAGGTACTCGCGTTGCTG-AGGGTCGCGAATG 16689 Query 119763 TATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCAT-TTCATTGTGTGACTGATA 119821 ||| | || ||||| |||||| ||||| |||| | | ||| || ||| | Sbjct 16690 TATGTGTCGATGAGCAGAGAGTATGTCTCCGAGTGAATGTTCTCCATCATG-ATCTGGAA 16748 Query 119822 GGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGCAAAATTGTTGTTGATATT 119881 | | || || | ||||| || | |||||| || | ||| | | || || Sbjct 16749 GCCGTAGAAGCATCGAGCCTCTGCTGCTTGCACCTCCGAACTAAACCGCTCGACGAGGTT 16808 Query 119882 TTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGATGTACTTTATGAATTTCTG 119941 || ||||| || || ||| | |||||||| || | || || | || || | | Sbjct 16809 CTCGTTGACAATACCGTCTGATGCTGCGAAGAAGGCGAGGACGTGGCTGATAAAGTGACG 16868 Query 119942 TTCATTATCGTTGA--GTGTT-TTCCAGTCGTCCATATCTTTAGACAAGTCCACCTCTTC 119998 ||||| ||||| | |||| | |||||||| ||| || || || | ||| | ||| || Sbjct 16869 CTCATTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTCGATCTCCTC 16928 Query 119999 AGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAGTTCCCA 120040 ||| |||||| || || |||||| || || | || ||| Sbjct 16929 AGCAGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTGCCA 16970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588949599150800