Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3431 113 3e-20 seq1114 113 3e-20 seq1890 98.7 6e-16 seq2921 96.9 2e-15 >seq3431 Length=10244 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| |||| ||||| || ||||| ||||| ||||| || | ||| | || || Sbjct 1114 ACCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGTCCGTCCTCG 1173 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||||||||||||||| || || || |||||||| | || | |||||||||||| Sbjct 1174 AGCTGTTTTCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGG 1233 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || || ||| || |||| ||| || || || Sbjct 1234 ATCTTGGTCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATCGTCTTG 1293 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || ||||| ||||| || ||||||||||| || Sbjct 1294 CCGGTGAGGGTCTTGACGAAGATCTGCATCTT 1325 >seq1114 Length=26360 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| |||||||| || |||| | || || ||||| || |||||||| Sbjct 18776 TTCCTTCTGGATGTTGTAGTCCGACAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCAAA 18835 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || ||||| | || | ||||||||||| ||||| |||||| Sbjct 18836 GATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTT 18895 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| || | ||| || |||| ||| || || || || |||||||||||||| Sbjct 18896 GTCAATCGTGTCGGATGACTCCACCTCGAGGGTGATCGTCTTGCCTGTGAGAGTCTTCAC 18955 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 18956 AAAGATCTGCAT 18967 >seq1890 Length=49107 Score = 98.7 bits (108), Expect = 6e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || || | || | || || Sbjct 41821 ACCAAGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCA 41880 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| |||||||| || || || ||||| ||||| |||| | ||||||||||| Sbjct 41881 AGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCCGGCGGAATGCCCTCCTTGTCCTGG 41940 Query 34893 ATCTTCTGT-TTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| ||| ||||| | || | || | ||| || |||| ||| ||||| || Sbjct 41941 ATCTT-TGTCTTGACATTGTCAATGGTGTCTGAAGACTCGACCTCGAGGGTGATGGTCTT 41999 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| || |||||||||||| Sbjct 42000 GCCGGTCAGCGTCTTGACGAAGATCTGCATA 42030 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/215 (71%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || || || ||||| ||||||||||| | || | || || Sbjct 41593 ACCAAGTGGAGTGTCGACTCCTTTTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCTTCA 41652 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || | || || ||||| | || | ||||||||||| Sbjct 41653 AGCTGCTTGCCGGCAAAGATCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 41712 Query 34893 ATCTTCTGT-TTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| ||| ||||| || | ||||| || | ||||| |||| ||| |||| Sbjct 41713 ATCTT-TGTCTTGAC--AT--TGTCGATGGTGTCTGAAGATTCAACCTCGAGGGTGATGG 41767 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || || ||||| || |||||||||||| Sbjct 41768 TCTTGCCGGTCAGCGTCTTGACGAAGATCTGCATA 41802 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | |||| || ||||||||||| ||||| || ||| | || | || || Sbjct 46512 ACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCA 46453 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || || || || || || || || || ||||| | || | ||||||||||| Sbjct 46452 AGTTGCTTGCCTGCGAAGATGAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 46393 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948 |||||| || || | | ||||| | ||| | ||||| |||| ||| ||||| Sbjct 46392 ATCTTCGTCTTTAC----GTTGTCGATTGTGTCCGATGATTCAACCTCGAGGGTGATGGT 46337 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || ||||| || |||||||||||| Sbjct 46336 CTTGCCGGTCAGGGTCTTGACGAAGATCTGCATA 46303 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| ||||| |||||| | || |||| || Sbjct 42049 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCA 42108 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| |||||||| || || || || || ||||| | || | ||||||||||| Sbjct 42109 AGCTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGG 42168 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || || ||| || |||| ||| ||||| || Sbjct 42169 ATCTTGGTCTTGACGTTGTCGATGGTATCTGAGGACTCGACCTCGAGGGTGATGGTCTTG 42228 Query 34953 CCCGTGAGAGTCTTCAC 34969 || || |||||||| || Sbjct 42229 CCGGTAAGAGTCTTAAC 42245 >seq2921 Length=71014 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||||||| | || | || || ||||| || ||||| || Sbjct 18143 TCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 18202 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 18203 ATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 18262 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| ||| || || || |||||||| ||||| || Sbjct 18263 TCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 18322 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 18323 AAAATCTGCAT 18333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324619412091408