Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2146 387 3e-102 seq2057 190 4e-43 >seq2146 Length=21837 Score = 387 bits (428), Expect = 3e-102 Identities = 1152/1754 (66%), Gaps = 71/1754 (4%) Strand=Plus/Minus Query 212687 CAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTC 212746 |||||| | |||||| || |||| ||||| | | ||| ||| ||||||||||| Sbjct 17254 CAGATGGATGTTCAGACTTTGGGACTGGCAGATGAAAGCGCCCCGGTCCGCGGCCATGTC 17195 Query 212747 TATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCC--TCT 212804 ||||| | |||| |||| |||||| || |||||| | | | |||| ||| || Sbjct 17194 AATGATGACCTTCTGCGAGATCTCCCAGACCGTCTTGTACAGCGCCTTGA--TCCGGTCC 17137 Query 212805 GGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTG---TATGGTCAGCTGCAGGCGCATG 212861 || | ||||| | ||||| | || || | || |||| || | | | ||| Sbjct 17136 GGAATCCCGGGCACATTCTGAATCGAGCCGCCATGCGCTATGATCCGGTTCTT---CATC 17080 Query 212862 TCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGAGGGTTGACTATCTG 212920 | ||||||||| || ||| || || | || | | | ||| |||||||| | || Sbjct 17079 TGCTCGTTCCACAG-CCCTTGCTCGACGAGCTCGCGGAGCAGCCACGGGTTGACGACTTG 17021 Query 212921 GAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTC 212980 ||| || || | ||||| | | ||| | ||| ||||| ||||| | || ||| Sbjct 17020 GAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGCTCGTGTAAGGCTCAAAGCACTC 16961 Query 212981 GTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTT 213040 |||| ||||| ||||| || ||| || ||||| || || | || || ||| Sbjct 16960 GTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCATAGGTGCGAGCAACAGCGAGTT 16901 Query 213041 CCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAG 213100 || | |||||| | | ||| |||| | ||| ||||||||||| |||| | Sbjct 16900 CCGAAGACCGTGCGAGGCAATGTTGCGCTTGATCTCAGCCCAGTCCCAA-----AGACCG 16846 Query 213101 GTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCC 213160 | || ||| ||||||||| |||| | ||| ||||| | |||| ||| Sbjct 16845 CTGGGGGTA----ACGCCCCACATGTCGTACTGGAGCTCGCCCTTGCTGGCCGGGCAGCC 16790 Query 213161 CTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGC 213220 || ||| | ||||| || |||||||||| |||||||| || || || || || Sbjct 16789 CTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCAAGCTCGCACGATCGCTCAAGAGCGGC 16730 Query 213221 GTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGAC-GTGAAGG 213279 || ||||||||| || || |||| ||||||||||||||||||| ||||| || || | Sbjct 16729 GTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTC--GGGACTGTCAAAG 16672 Query 213280 GCAT----CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGT 213335 || | ||| || | | ||| | || || || || | ||| |||||||||||||| Sbjct 16671 GCGTAGCCCATGAT-CAT--GAATGCGTCGGCGAGACCGTTGACTCCGATGCCGATGGGG 16615 Query 213336 CTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATC 213395 | ||| | || ||| ||||| | ||| || ||||| |||| ||||||||| Sbjct 16614 CGGTGGCGCATGTTCGACTTCTTGGCCTCGGGCACAGGGTAGTAGTTCACATCGATGATC 16555 Query 213396 TTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG---TGAT-TGAA 213451 ||||||||||||| | | || |||||||| | | || | || | | || || Sbjct 16554 TTGTTGAGGTTGCCACAGACGACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCATATGTC 16495 Query 213452 CACGTA-------GCCCC-CGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 | ||| || ||| || | | ||||| || || ||||| |||||| Sbjct 16494 CTCGTGTTGGTTTGCGAGTCGTAATGGATGTAGGTCGGCAGAGCCATACTGGCAAGGTTG 16435 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 || || || ||||| | | | ||||||| |||||||| ||||| ||||| | Sbjct 16434 CAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGATCTCCGTGCAAAGGTTAGAGTTC 16375 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATG 213623 ||||||||| ||||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct 16374 TTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTAAAGCATG 16315 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTG 213683 | ||| || ||||| ||||| | |||| | | |||||| | | |||||| Sbjct 16314 AAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGGCGTACCAGAGCTTCTGAGCCTTG 16255 Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTC 213742 ||| || | || || | | || |||||||| |||||||| | | |||||| Sbjct 16254 ACCGTGCGGCGAGCA----CGACCCTCGCGCTCGTACTTCTCGTAGAGGGCCTCGAATTC 16199 Query 213743 GTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCC 213802 | || |||| | | || || || || ||||| |||||||| ||| || || Sbjct 16198 CTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCACATGAGCGACCACTCTCC 16139 Query 213803 GTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCT 213862 || | | ||||| || |||||||| ||| || | ||| || ||| ||| || || | Sbjct 16138 GTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAGGGCGTAGAAGAGCTCACG 16079 Query 213863 GGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGC 213922 || | ||| ||| || ||| || | || || || || || |||| ||||| Sbjct 16078 GGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCCGA 16019 Query 213923 GTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC 213979 |||||| ||||| |||||||||||||| || |||| || | ||||| |||||||| || Sbjct 16018 GTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTTGTTGCCACCCTGGTCGAC 15959 Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039 | || ||||||||| || || | ||| || | |||||||| ||||| Sbjct 15958 GTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGAGACGCCGTT 15899 Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGC---TCATGGAGAGCCCTATGCC 214096 |||||| || || || ||||||| | |||| || ||| ||| |||||| ||||| Sbjct 15898 GGTTCCAGCAATGTAAGAGCCGGTG--CCTC-GGATGCAGTGAATGTTGAGCCCGATGCC 15842 Query 214097 ACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCT 214156 |||||| |||| |||||||||||| | | | || || |||||| | ||| Sbjct 15841 ACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCGTAGATGCCATCGATGGA 15782 Query 214157 GTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTT 214216 |||||| | | | | || ||||||| || | |||||| ||| | || | || Sbjct 15781 GTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGGTTGGGTGTTCCGGCATT 15722 Query 214217 GAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCA- 214275 ||| || ||||| ||| ||| | | |||| | || | ||| |||| || || | Sbjct 15721 GAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGTGTCGAT 15662 Query 214276 GGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGG 214335 || ||| | ||||| || ||| || | ||| | ||| ||||| || || | Sbjct 15661 GGCCTG-GTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCGCATGAGCATATGTTGCG 15603 Query 214336 GCCTCTCTATGGGTCCTTTGGGGCCCTT------GAGCAGGTAGGAGCGCTCCAGAGTCT 214389 ||||||| | | |||| ||| || ||||| || |||||||| ||||||| Sbjct 15602 GCCTCTC--GGCGACCTT----GCCGTTAATGCGCAGCAGATAAGAGCGCTCGAGAGTCT 15549 Query 214390 TGAACCCAAAGTAG 214403 |||| || |||||| Sbjct 15548 TGAAGCCGAAGTAG 15535 >seq2057 Length=22280 Score = 190 bits (210), Expect = 4e-43 Identities = 543/827 (66%), Gaps = 21/827 (3%) Strand=Plus/Plus Query 47860 CTCA-AAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGG 47918 |||| || ||||| ||||| || | || |||||||||||||||||| |||||| || | Sbjct 16148 CTCACAAAAAGTTAGTCTTTCCTTGCAGAGAGATGTTCTCCATGAAGTCGAAGGGATTTG 16207 Query 47919 GTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCG 47977 | || || | | || ||| | ||||||| | || ||||| ||||| Sbjct 16208 TCGCATTGTAGTGCT-TCTCGTTGCCGAGGGCGACCAGCAGTCGGTCGGCGACAAACTCG 16266 Query 47978 ATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTG 48037 ||||||| ||| || | ||||||||| || | || |||| || | ||| Sbjct 16267 ATGTATTGGCTCATCAGACGGGCGTTCATGCCGATCAATGAACATGGCAGCGCATCAGTG 16326 Query 48038 AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAG 48097 || || | | ||| || || ||||| || | || || ||| || || || Sbjct 16327 AGGAAAGCTTGCTCGATGGTGACAGCTTCGCCAATGATGCGCAAGACG----AC-CTCAG 16381 Query 48098 GGTTTGTTGCGCAGGTGCTTGGCAT------AGAGCATGCAGGCAAAGTCCCTGTGCAAG 48151 ||| || |||| | |||| || |||| | ||| |||||||| |||||| Sbjct 16382 GGTGTGG-GCGC---TTCTTGAGATGACTGAAGAGTAGGCACGCAAAGTCGGTGTGCAGA 16437 Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211 || ||||| |||||||||||| |||||||||| ||| || ||||||| || | || Sbjct 16438 CCCTCGTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGACCGCGCTTC 16497 Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 ||||||||||| || | || || || ||||||||||||||||||||||| || ||||| Sbjct 16498 TTGAGCCAGAAGATGGAGGCAAAGGACCCAGAGAAGAAGATGCCCTCCACGGCGGCGAAG 16557 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 ||| | | | ||| | || | | | |||| |||||| | ||||| || Sbjct 16558 GCGATCAATCGCTCAGCAAAGGTCGATTCGGTGTCGTTGATCCACCGCATGGCCCACTCG 16617 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCT 48391 ||||| | ||||| | || || ||||| ||||| ||||| | || || | Sbjct 16618 GCCTTTTGCTTGACGACAGGGATGGTCTCCATGGCATCAAAGAGGTACTCGCGTTGCTGA 16677 Query 48392 GCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATA 48451 | ||| || || || || ||| | ||| |||| ||||| | ||||| || Sbjct 16678 GGGTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTCTCCGAGTGAATGTTCTCCATC 16737 Query 48452 GCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTC 48511 ||||||||| ||||||||| | ||||| | ||||| || | || | | Sbjct 16738 ATGATCTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCTTGCACCTCCGAACTAAACCGC 16797 Query 48512 TCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTA 48571 || | || ||||| ||||| || || ||||| || || |||||||| ||||| || | Sbjct 16798 TCGACGAGGTTCTCGTTGACAATACCGTCTGATGCTGCGAAGAAGGCGAGGACGTGGCTG 16857 Query 48572 AGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCCCAGG 48628 | || || ||||| |||| | | | || |||| | || | ||| ||| ||| Sbjct 16858 ATAAAGTGACGCTCATTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGG 16917 Query 48629 TCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 || | || || |||||||||| || || ||| || |||||||| Sbjct 16918 TCGATCTCCTCAGCAGTCCAGAACGATGCCTCTGCCTTCTTGTACAT 16964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931491044042240