Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2146 322 9e-83 seq2057 208 1e-48 >seq2146 Length=21837 Score = 322 bits (356), Expect = 9e-83 Identities = 861/1296 (66%), Gaps = 55/1296 (4%) Strand=Plus/Minus Query 221358 CCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCG 221417 |||| | || ||||| | |||||||| ||| | | ||| | |||| || || Sbjct 16799 CCGGGCAGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCAAGCTCGCACGATCGCT 16740 Query 221418 TCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAG 221477 || || ||||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct 16739 CAAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTCGGGAC 16680 Query 221478 AAGTGAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 || || ||| || | || ||| |||| | ||||||| || || | |||||||| || Sbjct 16679 T-GTCAAAGGCGTAGCCCATGATCATGAATG-CGTCGGCGAGACCGTTGACTCCGATGCC 16622 Query 221536 GATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTC 221595 |||||| | ||| | | |||| || || || ||||| || || |||| || || Sbjct 16621 GATGGGGCGGTGGCGCATGTTCGACTTCTTGGCCTCGGGCACAGGGTAGTAGTTCACATC 16562 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655 ||| | ||||||||||| | || ||| || |||||| ||||||| | Sbjct 16561 GATGATCTTGTTGAGGTTGCCACAGACGACCTTGGTGACCTCGTGAAGCTTCT------T 16508 Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACA---AAAGCGTTTAGG-------- 221704 ||| | | | | ||||| || | | | || | | |||| Sbjct 16507 GAAGTCATAT-----GTCCTCGTGTTGGTTTGCGAGTCGTAATGGATGTAGGTCGGCAGA 16453 Query 221705 GCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCT 221764 || | ||||| ||||| || || || ||||||||| | | |||| ||||||||| Sbjct 16452 GCCATACTGGCAAGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGATCTCC 16393 Query 221765 GTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824 || || ||||| | ||||||||| || |||| || || || |||||||| |||||| Sbjct 16392 GTGCAAAGGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCA 16333 Query 221825 GCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCC 221884 ||||||||||| ||||| || || |||||||||| ||| ||| |||||| || | Sbjct 16332 GCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGGCGTAC 16273 Query 221885 CAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGT 221943 ||||| | |||| || | ||||| | | ||||||| || | | | || Sbjct 16272 CAGAGCT-TCTGAGCCTTGACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTTCTCG-- 16216 Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACA 222003 ||||| || || | ||||| || | ||| | || || || ||| ||||| || Sbjct 16215 -TAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCA 16157 Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063 ||| || ||| | ||| | || ||| | || |||||| | ||| || ||||| || Sbjct 16156 CATGAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAG 16097 Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123 || | ||||| || | || || ||||||| ||||| ||| ||||| || || | Sbjct 16096 GGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAG 16037 Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTT 222183 ||||| || | ||| | |||||| ||||| | |||| ||| | ||| || |||||||| Sbjct 16036 GAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTT 15977 Query 222184 GTTGCCACCCTGATCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTA 222239 |||||||||||| || | | | | || | |||||||| ||||| | || | Sbjct 15976 GTTGCCACCCTGGTCGA----CGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAA 15921 Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299 | | |||||||| |||||||| || |||||| | ||| | |||| || | | Sbjct 15920 CAATGCCGTTGGAGACGCCGTTGGTTCCAGCAATGTAAGAGCCG--GTGCCTC-GGATGC 15864 Query 222300 TGGCAGACATG---CCGATACCACCGG-CGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355 | | || ||||| ||||||| ||| || | |||||||||||| ||||||| Sbjct 15863 AGTGAATGTTGAGCCCGATGCCACCGGCCGTCTTGC-TGATCATGGCGCAAGTCTTGAGG 15805 Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415 ||||| |||||| || || ||||| ||||| | | | ||| || || || |||||| Sbjct 15804 GTGTCGTAGATGCCATCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATC 15745 Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475 || | |||| | | ||| || || || ||||| |||||| || ||||| | Sbjct 15744 TGGGGGTTGGGTGTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCC 15685 Query 222476 GACATCAGATCGTACGTCTCTACGACTCTGG-CGATGTTGTCCCCGTGAATCTGCATGGC 222534 ||||| || | ||| || || | | | |||| | |||| ||||||||| | ||| Sbjct 15684 GACATGAGGTTGTAAGTGTCGATGGC-CTGGTCAATGTCCCGCCCGTGAATGCCGACGGC 15626 Query 222535 GCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAG---CTGGAGAGCAG 222591 | || |||| ||| | || |||||||| | || ||||| | || ||||| Sbjct 15625 GACTCGCATGAGCATATGTTGCGGCCTCTCGGC--GA-CCTTGCCGTTAATGCGCAGCAG 15569 Query 222592 GTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTT 222627 || || || ||||||||||| || |||||||| Sbjct 15568 ATAAGAGCGCTCGAGAGTCTTGAAGCCGAAGTAGTT 15533 >seq2057 Length=22280 Score = 208 bits (230), Expect = 1e-48 Identities = 544/830 (66%), Gaps = 18/830 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||| || || ||||| || || Sbjct 16973 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACTGCTGAGGAGATCGACCTT 16914 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTCAAG 25593 ||||||||||| ||| |||| || | || ||| |||| || ||| ||| Sbjct 16913 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAATGAGCGTCACTTTATCAGC 16854 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| ||||| || || ||||| || |||||||| || |||| | Sbjct 16853 CACGTCCTCGCCTTCTTCGCAGCATCAGACGGTATTGTCAACGAGAACCTCGTCGAGCGG 16794 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 || | ||| ||||| | ||||| || |||||||| |||||||| || Sbjct 16793 TTTAGTTCGGAGGTGCAAGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATG 16734 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACG-TCGC 25772 || || | ||||| ||| || | ||| | || |||||| ||| || Sbjct 16733 GAGAACATTCACTCGGAGACATACTCTCTGCTCATCGACACATACATTCGCGACCCTCAG 16674 Query 25773 CGA-GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831 | | | ||| | || |||| |||||| ||| ||| || | ||||| ||||| Sbjct 16673 CAACGCGAGTAC--CTCTTTGATGCCATGGAGACCATCCCTGTCGTCAAGCAAAAGGCCG 16616 Query 25832 GGTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 |||||||||| |||||||||| | | || | || |||| ||||| || | ||| Sbjct 16615 AGTGGGCCATGCGGTGGATCAACGACACCGAAT-CGACCTTTGCTGAGCGATTGATCGCC 16557 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 || || || |||||||||||||| ||| || || ||||| ||||||||||||||||| Sbjct 16556 TTCGCCGCCGTGGAGGGCATCTTCTTCTCTGGGTCCTTTGCCTCCATCTTCTGGCTCAAG 16497 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || ||||||||| || || |||||||||||||||||| | ||||||||| Sbjct 16496 AAGCGCGGTCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCAGCCGAGACGAGGGT 16437 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA- 26069 || |||| || ||||| ||||| |||| || | || ||| | || | | || Sbjct 16436 CTGCACACCGACTTTGCGTGCCTACTCTTCA---GTCA---TCTCAAGAAGCGCCCACAC 16383 Query 26070 --AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 ||| ||||| | ||||| || ||||| |||||| | | || | Sbjct 16382 CCTGAGGTCGTCTTGCGCATCATTGGCGAAGCTGTCACCATCGAGCAAGCTTTCCTCACT 16323 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187 | ||||||||| | | || |||||||||||||| ||| Sbjct 16322 GATGCGCTGCCATGTTCATTGATCGGCATGAACGCCCGTCTGATGAGCCAATACATCGAG 16263 Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAAC 26247 | ||| ||||||| |||||| | || || || | | ||||| | || | || Sbjct 16262 TTTGTCGCCGACCGACTGCTGGTCGCCCTCGGCAACGAGAAGCACTACAATGCGACAAAT 16203 Query 26248 CCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTT 26297 || |||||||| ||||| ||||| || || |||| ||||| ||||| || Sbjct 16202 CCCTTCGACTTCATGGAGAACATCTCTCTGCAAGGAAAGACTAACTTTTT 16153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928803164531840