Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2146 187 3e-42 seq2057 87.8 2e-12 >seq2146 Length=21837 Score = 187 bits (206), Expect = 3e-42 Identities = 550/833 (66%), Gaps = 15/833 (2%) Strand=Plus/Plus Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280 ||| ||||||| ||||| ||||||| |||||| |||||||| | | | || || Sbjct 15611 ATGCTCATGCGAGTCGCCGTCGGCATTCACGGGCGGGACATTGACCAGGCCATCGACACT 15670 Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339 ||| || ||||| | | ||| |||| ||||| | || |||||||||||||| || Sbjct 15671 TACAACCTCATGTCGGAGAAGTAC-TTCACCCACGCCTCGCCCACCCTCTTCAATGCCGG 15729 Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399 ||||| | || |||||||| |||||||| || | | ||||| ||||| ||| | Sbjct 15730 AACACCCAACCCCCAGATGTCATCCTGCTTCCTGGTCACGATGAAGGATGACTCCATCGA 15789 Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA--AAGTGGGCTGGGGGTATT 75457 || ||||| | || || | | | | ||||| | ||| ||| ||| || || || Sbjct 15790 TGGCATCTACGACACCCTCAAG-ACT-TGCGCCATGATCAGCAAGACGGCCGGTGGCATC 15847 Query 75458 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 75517 ||| | |||| || | ||| || ||| ||| || || || || Sbjct 15848 GGGCTCAACATTCACTGCATCCGAGGCACCGGCTCTTACATTGCTGGAACCAACGGCGTC 15907 Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577 || | || ||| |||| |||||||| || || ||| ||| || ||||| || | || Sbjct 15908 TCCAACGGCATTGTTCCCATGCTTCGAGTCTTCAACAACACCGCTCGCTACGTCGACCAG 15967 Query 75578 GCGGGGCGTC--GCAA--GGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATAT 75633 | | ||| | || | |||| | | || ||||| | || || ||||| | || | Sbjct 15968 G-GTGGCAACAAGCGACCGGGGGCTTTTGCCATCTACATTGAGCCTTGGCACTCGGACGT 16026 Query 75634 CATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCT 75693 | | |||||||| || | | ||||| || | || |||| ||| | || || Sbjct 16027 CTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGTGAGCT 16086 Query 75694 CTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATG 75753 ||| | |||| |||||||| ||| | ||||||||||| || || || || | || Sbjct 16087 CTTCTACGCCCTTTGGATTCCCGACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTG 16146 Query 75754 GTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGA 75813 ||| || | || || | || || ||||| |||||| |||||||| || || Sbjct 16147 GTCGCTCATGTGCCCCGCTGAGTGCCCCGGTCTTGCCGACGTCTATGGTGAGGAATTCGA 16206 Query 75814 AGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC-CAATGCGACTGTACCAGCCGCCG 75872 ||||||||| ||||| || |||||| | || | || || || | || | | | Sbjct 16207 GGCCCTCTACGAGAAGTACGAGCGCGAGGGTCGTGCTCGCCGC-ACGGT-CAAGGCTCAG 16264 Query 75873 ATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTAC 75931 | | | ||| | || |||| | | |||||||||||||| | || | ||||||||| Sbjct 16265 AAGCTCTGGTACGCCGTTCTGGAGGCCCAGACGGAGACTGGCAACCCTTTCATGCTTTAC 16324 Query 75932 AAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAAT 75991 ||||| ||| ||| ||| ||||| ||||| | || || ||||||| ||| || Sbjct 16325 AAGGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCACCATCAAGAACTCTAAC 16384 Query 75992 CTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 ||||||||||| || ||||||||| | | ||| ||| ||||| ||||| Sbjct 16385 CTTTGCACGGAGATCATAGAGTACAGCGCTCCGGACGAGGTCGCTGTCTGCAA 16437 >seq2057 Length=22280 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 |||||||| ||||||||||| ||||| || | | || | ||| | |||||||| ||| Sbjct 16547 GTGGAGGGCATCTTCTTCTCTGGGTCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 16488 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAG 65220 |||||||| ||||| ||||| || || || || |||||| |||||||| ||| Sbjct 16487 CTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACC 16428 Query 65221 GAGTTTGC 65228 || ||||| Sbjct 16427 GACTTTGC 16420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596542858767680