Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq2437 226 8e-55 >seq2437 Length=1412 Score = 226 bits (250), Expect = 8e-55 Identities = 327/458 (71%), Gaps = 4/458 (1%) Strand=Plus/Plus Query 20225 TGAGGAATCCCCAGAAAAGA-AGACAGGCAGAGGGAGGCTTGTGATCTAATGATTGCGCT 20283 ||| ||||||||| |||| |||||| || || || ||||||||| ||||| | Sbjct 72 TGACGAATCCCCACAAAAATGAGACAGACATAGCAAGA--TGTGATCTACTGATTCTTCC 129 Query 20284 AACAAATTCAATGAGATCACCTCTATGCCTGCCCGTAAAGTATGCCAGACTTTTTTCCGT 20343 | ||||||||||| ||||||| |||||||||||||||||||||| |||| |||||| | Sbjct 130 A-CAAATTCAATGGGATCACCGCTATGCCTGCCCGTAAAGTATGTCAGAATTTTTTTCAG 188 Query 20344 AATGCTTTAGCTTCCACGCATCAGTATCGACAAAATGCCATTATTGATTCTGCTGCTGCT 20403 ||||| | | ||| || |||| || || | || | ||||| | | | |||| Sbjct 189 GATGCTCTCGGTTCTTTCCACAAGTACCGGCAGAGCGCTCTGGTTGATGCCACGGTTGCT 248 Query 20404 TTAGTCGGTGGCGCATCTCTTTCTCTTACCAGCATTGGCCGGCATTTACCCGGTCCTGCT 20463 ||| || || ||||| || | || || | || || || | |||| || | ||| Sbjct 249 TTAATCAAGGGGGCATCGCTGACGCTAACGCGTATCGGACGTTTTCTACCGGGACAGGCT 308 Query 20464 CGCGTGAAAGATAAAATAAAACGCGTTGACCGTCTGTTGGGTAATAAACGACTTCATAAT 20523 | || ||| | ||||| ||||| || || || ||| |||| || | |||||| || Sbjct 309 CAGGTAAAAAACAAAATCAAACGAGTAGATCGCCTGCTGGGGAACGAGTCACTTCAGAAG 368 Query 20524 GATATCCCTCTGATATTCAAAAATATTACATCCATGATGACAAATAAACTGTCGTGGTGT 20583 ||||| || |||| || |||| ||||| || ||| |||| | || || |||| || Sbjct 369 GATATTCCGATGATTTTTAAAAGTATTATTTCAATGCTGACCAGCAAGCTATCGTTATGC 428 Query 20584 GTTATCGCTGTTGACTGGAGCGGTTACCCTTTTCAGGAATATCATGTCCTTCGTGCCAGC 20643 || || || || |||||||| ||||| || | |||||| ||||| || || | || ||| Sbjct 429 GTGATAGCCGTAGACTGGAGTGGTTATCCATCTCAGGAGTATCACGTTCTCAGGGCAAGC 488 Query 20644 CTCCTCTGCGACGGTCGCTCTATCCCCCTGATGAGTCA 20681 || | |||||||||||||| || |||||| |||| || Sbjct 489 CTGATTTGCGACGGTCGCTCAATACCCCTGCTGAGCCA 526 Score = 102 bits (112), Expect = 2e-17 Identities = 159/225 (71%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 21139 ATCATGAAACTGTACAGTCGAAGAATGCAGATAGAGCAAAACTTTCGGGATGAAAAAAGT 21198 |||||||| ||||||||||| |||||||||||||||| || || || ||||| ||||| Sbjct 969 ATCATGAAGCTGTACAGTCGTCGAATGCAGATAGAGCAGAATTTCCGCGATGAGAAAAGC 1028 Query 21199 GAACGCTTTGGTTTTGGCCTTCGGGCGAG---CAGAAG-TCGGAGGGGAGAGCGTTTTCT 21254 |||||||| || ||||| | || || || ||| | || | || ||| | | Sbjct 1029 GAACGCTTCGGGTTTGGGTTACGAGCCAGTTACAGCCGTTCCGCCGGAAGA----ATACA 1084 Query 21255 GGTATTAAGTCTACTGGTTACACTGGCCAGTATCGTACTCTGGCTACTTGGTTATCATTT 21314 ||| | ||||| |||| || ||| | || || || |||||||| || | || Sbjct 1085 GGTGCTGAGTCTGCTGGCAACGCTGAGTACGATAGTGCTGTGGCTACTGGGGTTCCACGC 1144 Query 21315 TGAAAATAAAGGATTTCATTTAAAGTATCAGGCTAATAGTCTCAA 21359 |||||| |||||||| ||| | |||||||| || || |||| Sbjct 1145 TGAAAACAAAGGATTGCATCTGCGATATCAGGCCAACAGCATCAA 1189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132592753462884