Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1313 183 4e-40 seq2146 178 2e-38 seq2057 156 5e-32 seq569 129 7e-24 seq3192 111 2e-18 seq2959 111 2e-18 seq136 96.9 4e-14 >seq1313 Length=25294 Score = 183 bits (202), Expect = 4e-40 Identities = 282/401 (70%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 |||||||||| ||||||||| ||| | || ||||||||||||| |||||||| ||| Sbjct 13184 GTCACCACCTATGGCGAGTCCCACTGCGCCTCCGTCGGCTGCATCGTCGACGGCTGCCCG 13125 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 || ||||| | || |||| | |||| ||||| ||| | || ||||| || ||| Sbjct 13124 CCCGGCATGGCCCTCTCCGACGACGACGTCCAGGTCCAGCTCAGCCGTCGCCGCCCTGGC 13065 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| | || |||| |||||| | ||| || |||||| |||||||| ||| Sbjct 13064 CAGTCCAACCTGACCACCCCGCGCGATGAGAAGGACCGCGTCCAGATCCAGTCCGGCGTC 13005 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 ||||| || |||| ||||| ||||| | | | | || |||| || ||||| Sbjct 13004 GAGAAGGGTATCACCCTCGGTACGCCCATTGCCATGCGCGTCCAGAACCAGGATCAGCGC 12945 Query 18328 CCCGTCGACTATTCCGA---CATGTGCAAGGT---GCCGCGGCCCTCACACGCCGACTAC 18381 ||| ||| || |||| || | | | | ||||| ||||| |||||||||||| Sbjct 12944 CCCAACGATTACACCGACCGCACGCTCGACCTCTACCCGCGCCCCTCCCACGCCGACTAC 12885 Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGC 18441 |||||| | | |||||||| |||||||| ||||||||||| || || ||||| Sbjct 12884 ACCTACCTTGAGAAGTACGGTGTCAAGGCGAGCTCGGGCGGAGGGCGCAGCTCGGCCCGG 12825 Query 18442 GAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 |||||| || |||||||| || || ||||| || ||||| Sbjct 12824 GAGACCATCGGACGCGTCGCTGCGGGTGCGGTTGCTGAGAA 12784 Score = 120 bits (132), Expect = 4e-21 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111 |||||||||||| ||||| || ||| || |||||| || ||||||||||| || Sbjct 12498 CATCGGCGGCACCGTGACCTGTGTGATCCGGGGCGTGCCCATCGGTCTCGGCGAGCCCTG 12439 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 |||||||||| ||||||| |||||||||||| ||||| || ||||| |||||||||| Sbjct 12438 CTTTGACAAGCTCGAGGCAAAGCTCGCCCACGCGATGCTCTCCATCCCCGCCACCAAGGC 12379 Query 19172 ATTCGAGATTGGCAGCGGGTT 19192 |||||| | ||| ||| || Sbjct 12378 CTTCGAGGTCGGCTCCGGCTT 12358 >seq2146 Length=21837 Score = 178 bits (196), Expect = 2e-38 Identities = 275/393 (70%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| ||||| || |||||||| || | ||||||||| Sbjct 15967 CTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGA 15908 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||||| || || | ||| | ||||| | | || | ||| | | || Sbjct 15907 GACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGAATGTTGAGCCC 15848 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| ||||||| |||| ||| | ||||| ||||| |||||||||||||| || Sbjct 15847 GATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCGTAGATGCCATC 15788 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| ||||| ||||||| || || ||||| || || | || |||| | || || Sbjct 15787 GATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGGTTGGGTGTTCC 15728 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||| |||||||| ||||||| || |||||| ||| | ||||||| || ||| || Sbjct 15727 GGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 15668 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | ||| ||| | || |||| || ||| | ||||| |||||| Sbjct 15667 GTCGA------TGGCCTGGTCAATGTCC-CG--------CCCGTGAATGCCGACGGCGAC 15623 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 ||||||||||| | || |||| |||| |||| Sbjct 15622 TCGCATGAGCATATGTTGCGGCCTCTCGGCGAC 15590 Score = 96.9 bits (106), Expect = 4e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || ||||| ||||| || || || || ||||||||||||||||||||| ||| Sbjct 16103 TCCAAAGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGA 16044 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| | |||| | ||| | |||||| ||||| | |||| |||||| || ||| Sbjct 16043 GGTCGAGGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCG 15984 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 15983 GTCGCTTGTTGCCACC 15968 Score = 93.3 bits (102), Expect = 5e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1627868 CGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGG 1627927 |||||||||| || | || |||| ||| || || |||||||||| |||||| | || Sbjct 16649 CGTCGGCGAGACCGTTGACTCCGATGCCGATGGGGCGGTGGCGCATGTTCGACTTCTTGG 16590 Query 1627928 CCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCT 1627987 |||||||||| ||||||| ||| | ||||| | |||||||||||| ||||||| Sbjct 16589 CCTCGGGCACAGGGTAGTAGTTCACATCGATGATCTTGTTGAGGTTGCCACAGACGACCT 16530 Query 1627988 GGACGATCTCGTGCAG 1628003 | || |||||| || Sbjct 16529 TGGTGACCTCGTGAAG 16514 >seq2057 Length=22280 Score = 156 bits (172), Expect = 5e-32 Identities = 212/288 (74%), Gaps = 7/288 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | |||||| || | ||||||||||||||| |||||||| Sbjct 16437 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGACCGCGCTT 16496 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | || || ||||| ||||||||||| |||||||| || Sbjct 16497 CTTGAGCCAGAAGATGGAGGCAAAGGACCCAGAGAAGAAGATGCCCTCCACGGCGGCGAA 16556 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | |||| | ||||| |||||| ||||| | | | |||||||||| ||| ||||| Sbjct 16557 GGCGATCAATCGCTCAGCAAAG--GTCGATTCGGT-GTCGTTGATCCACCGCATGGCCCA 16613 Query 869359 GTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTC-CTTT 869416 |||||||||| | | | |||| || | || || ||||| |||||||| || | || Sbjct 16614 CTCGGCCTTTTGCTTGA-CGACAGGGATGGTCTCCATGGCATCAAAGAGGTACTCGCGTT 16672 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | | ||||| | || |||||||| || || || || |||||| Sbjct 16673 GCTG-AGGGTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTCTCC 16719 Score = 125 bits (138), Expect = 9e-23 Identities = 180/253 (71%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| |||||||| || ||||||||||||||| ||| | ||||||| ||| Sbjct 16718 CCGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCTT 16777 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | |||||| | ||||| || | ||||||||| || || ||||| || |||| Sbjct 16778 GCACCTCCGAACTAAACCGCTCGACGAGGTTCTCGTTGACAATACCGTCTGATGCTGCGA 16837 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGT 869807 | || || |||||||| |||||||||| ||||| | |||| | | | |||||| Sbjct 16838 AGAAGGCGAGGACGTGGCTGATAAAGTGACGCTCATTGTCGTTCAACTTGTTGTCCCAGT 16897 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | |||| | ||||| | |||||| || ||||||| ||| ||||| ||||| | Sbjct 16898 CGTGCATGTCCTTGGAAAGGTCGATCTCCTCAGCAGTCCAGAACGATGCCTCTGCCTTCT 16957 Query 869868 TGTACATCTCCCA 869880 ||||||| | ||| Sbjct 16958 TGTACATTTGCCA 16970 Score = 118 bits (130), Expect = 1e-20 Identities = 205/292 (70%), Gaps = 7/292 (2%) Strand=Plus/Plus Query 868721 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC 868780 |||||||| ||||| || | || ||||| |||||| | ||| || || | || Sbjct 16153 AAAAAGTTAGTCTTTCCTTGCAGAGAGATGTTCTCCATGAAGTCGAAGGGATTTGTCGCA 16212 Query 868781 TTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTAC 868840 ||||||||||| ||| ||||| | | ||||| ||||||||||||||||||||||| Sbjct 16213 TTGTAGTGCTTCTCGTTGCCGAGGGCGACCAGCAGTCGGTCGGCGACAAACTCGATGTAT 16272 Query 868841 TGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAAC 868900 |||| ||| || | ||||||||||||||| | | ||||||| || | | || Sbjct 16273 TGGCTCATCAGACGGGCGTTCATGCCGATCAATGAACATGGCAGCGCATCAGTGAGGAAA 16332 Query 868901 TCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTC-GGCCGAGG--GC 868957 ||| |||||| ||| || ||| | ||||| || | || || || | || || Sbjct 16333 GCTTGCTCGATGGTGACAGCTTCGCCAATGATGCGCAAGACGACCTCAGGGTGTGGGCGC 16392 Query 868958 TTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA-ACCCT 869008 || |||| || | || |||| ||||| ||||||||| ||||| ||||| Sbjct 16393 TTCTTGA-GATGA--CTGAAGAGTAGGCACGCAAAGTCGGTGTGCAGACCCT 16441 >seq569 Length=29348 Score = 129 bits (142), Expect = 7e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 1573971 GCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATC 1574030 ||||| ||||| || |||||||| |||||||| || |||||||||| || || | ||| Sbjct 7332 GCCGTCCTCGAGCTGAACGCGTCCGACGAGCGAGGAATCGACGTCGTCCGGAATAAGATC 7391 Query 1574031 AAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTC 1574090 ||| | ||| || | || ||| |||||||| || |||||| | ||||||||| Sbjct 7392 AAGAGCTTTGCCCAAAAAACAGTCACCCTACCGCCCGGCCGGCACAAGCTCATCATCCTC 7451 Query 1574091 GACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAG 1574150 ||||| |||||| || | || || | ||||||||||| || || |||||||| | Sbjct 7452 GACGAAGCCGACAGCATGACCTCAGGAGCCCAGCAGGCGCTCCGACGGACCATGGAGATC 7511 Query 1574151 CACACCAACACGACGCGCTTTGCCCTGGCGTGCAAC 1574186 || ||| |||||| ||||| | | ||||| ||| Sbjct 7512 TACTCCAGCACGACCCGCTTCTGCTTTGCGTGTAAC 7547 >seq3192 Length=13222 Score = 111 bits (122), Expect = 2e-18 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 509036 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 509095 ||||| ||||| ||||||||| ||||||||| |||||| || | | ||| || | Sbjct 1272 CCCGAAAGCCGTGGCTTTGTGGAGAACTCGTACCTGCGCGGTCTGACCGCGCAGGAATTC 1331 Query 509096 TTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAG 509155 || | ||| || | ||| || || || || | |||||||| ||||||||||| ||| Sbjct 1332 TTCTTCCACGCCATGGCCGGTCGGGAAGGTCTGATTGACACGGCTGTCAAGACGGCTGAG 1391 Query 509156 ACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAG 509194 |||||||||||||||||||| | |||||| || | ||| Sbjct 1392 ACGGGCTACATCCAGCGCCGCTTGATCAAGGCGCTCGAG 1430 Score = 91.5 bits (100), Expect = 2e-12 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 507714 TCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGC 507773 ||||||| | |||||| | ||||| ||||||||||||||||||||||||||| ||| Sbjct 298 TCAACCTTTCGGTCACGCCTCCGTACAATGCCGACTTTGACGGCGACGAGATGAACTTGC 357 Query 507774 ACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACACCATGAGCGTGTCGCTCA 507833 | || || ||| |||| | | || || ||| | | || | | | || ||| | Sbjct 358 ATGTACCGCAGAGCGAGGAGACCCGAGCTGAGCTCAGCCAGATCGCCTGGGTCGCGCGGA 417 Query 507834 AGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGACGCCCT 507888 | | ||||| |||||||| ||||||||| | || ||| | || |||| |||| Sbjct 418 ACATTGTGTCCCCGCAGGCGAACAAGCCCGTGATGGGCATCGTGCAGGACACCCT 472 >seq2959 Length=17512 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | |||||| || ||||| || ||||||||||| | || Sbjct 12349 GCTTGGAAAGTTCACCGGGGAGGATCAGCCGGACGGCCGTTTGGATCTCGCGGGCAGAGA 12290 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | |||||||| | ||||||| |||| | Sbjct 12289 TGGTCGACTTCTTGTTGTAGGATGCAAGCTTGGAGGCCTCGGAGGCGATGCGCTCGAAGA 12230 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | |||||| ||||| | || | ||| | |||||| ||||| || |||||||| Sbjct 12229 TGTCCTGGACAAAGGAGTTGAGGATGGCCATGGCCTTGTTTGAGATACCAGTGTCGGGGT 12170 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| || ||||||| Sbjct 12169 GCACCTGCTTGAGGACACGGTAGATG 12144 >seq136 Length=32467 Score = 96.9 bits (106), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| |||||| || ||| ||||| || ||||| || |||||||| || | | | Sbjct 774 GCTTGGACAGTTCACCCGGCAAGATCAACCGAACGGCAGTTTGGATCTCCCGTGCGGAAA 833 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| | |||||| | || || | ||||||| || | | Sbjct 834 TGGTGCTCTTCTTGTTGTACGACGCCAGCTTGGACGCTTCCGACGCGATGCGCTCAAAGA 893 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | || |||||||||| || || ||| | |||||||||||||||| ||| |||| Sbjct 894 TGTCTTGCACGAACGAGTTCAGGATCGCCATGGCCTTGTTGGAGATGCCCGTGTCTGGGT 953 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || ||||| || || ||||||| Sbjct 954 GGACTTGCTTCAGGACGCGGTAGATG 979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106844916046762