Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2146 196 4e-45 seq1890 132 4e-26 seq1114 129 5e-25 seq3431 96.9 3e-15 >seq2146 Length=21837 Score = 196 bits (216), Expect = 4e-45 Identities = 975/1520 (64%), Gaps = 52/1520 (3%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | ||| || || || || |||| || || || ||| | |||| | ||| |||| Sbjct 17032 GTTGACGACTTGGAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGCTCGTGTAAGG 16973 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 |||||| | |||||| ||||| |||||| ||| | || |||||||| || | Sbjct 16972 CTCAAAGCACTCGTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCATAGGTGCGAG 16913 Query 138621 CAAAAGAGAATTCCGTAAACCGTG--AAGCT-TGATTCGTTCCTTGAGCGACGACCAGTC 138677 ||| || || ||||| | |||||| | || || | || ||||| | | |||||| Sbjct 16912 CAACAGCGAGTTCCGAAGACCGTGCGAGGCAATGTTGCG---CTTGATCTCAGCCCAGTC 16856 Query 138678 CCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGG 138737 ||| | | |||| || | | |||||| |||||||| | | ||| || || || Sbjct 16855 CCAAAGACCGCTGGGGGTAACGCCCCACATGTCGTACTGGAGCTCGCCCTTGCTGGCCGG 16796 Query 138738 ACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTT-GCTCGCCTCGA 138796 | ||| ||||| | ||||| || | ||| | || | |||| | |||| || | Sbjct 16795 GCAGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCAAGCTCGCACGATCGC-TCAA 16737 Query 138797 GCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCT 138856 | || | | ||| || || ||| ||||| |||||| |||||||| || | Sbjct 16736 GAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTCGGGACTGT 16677 Query 138857 CGTACGGCAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACA 138915 | | ||| | || | ||| |||| |||||||| || || | || || | |||| Sbjct 16676 CAAA-GGCGTAGCCCATGATCATGAATGCGTCGGCGAGACCGTTGACTCCGATGCCGATG 16618 Query 138916 GGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCG 138972 ||||| ||||||| || ||| || ||| ||| | ||| || ||||| |||||| Sbjct 16617 GGGCGGTGGCGCATGTTCGACTTCTT---GGCCTCGGGCACAGGGTAGTAGTTCACATCG 16561 Query 138973 ATGATTTTGTTTAAATTTCGCAC-GACCACCTTAGTCGTATGCTTTAATCGT-TCAAAAT 139030 ||||| ||||| | || | ||| ||| ||||| || | | | || | | | || | Sbjct 16560 ATGATCTTGTTGAGGTTGC-CACAGACGACCTTGGT-GACCTCGTGAAGCTTCTTGAAGT 16503 Query 139031 CGTATGTGCCCCCGTTGTCGTCGACGACGTCG--ACAAATTT--GTTGACACA--AATCG 139084 | ||||| || ||| | || ||| |||| | || | || | || | || Sbjct 16502 CATATGT--CCTCGTGTTGGTTTGCGA-GTCGTAATGGATGTAGGTCGGCAGAGCCATAC 16446 Query 139085 AGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACA 139144 ||| | |||||| || || || ||||| || ||||||| || | || || | || | Sbjct 16445 TGGCAAGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGATCTCCGTGCAAA 16386 Query 139145 AATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTT 139204 ||| |||||| || || | || | || || || ||||| ||| || | Sbjct 16385 GGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCT 16326 Query 139205 TGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGT 139264 |||||||||| | || ||||||| ||| || | ||| | || | | | | | Sbjct 16325 TGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGGCGTACCAGAGCT 16266 Query 139265 CCCTAG-CTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCG 139323 | || |||| || || | | | | |||||||||||||| |||||||| | Sbjct 16265 TCTGAGCCTTGACCGTGCGGCGAG-CACGACCCTCGCGCTCGTACTTCTCGTAGAGGGCC 16207 Query 139324 TCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGAC 139383 |||||| ||||| ||| |||| | |||| || | |||| | || |||||||||||| Sbjct 16206 TCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCACATGAGCGAC 16147 Query 139384 CATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGC---GAAC 139440 || | |||||| | ||| ||| ||||||||| || |||||||| | || ||| Sbjct 16146 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAGGGCGTAGAAG 16087 Query 139441 AGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCA 139500 ||| | || |||| | || ||| || ||| | | || ||||| || Sbjct 16086 AGCTCA-CGGGCGCGAAC--CTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCG 16030 Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCA 139557 || ||||| | |||||| || || | |||||||| | || || | | |||||| Sbjct 16029 AAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTTGTTGCCA 15970 Query 139558 CCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTC 139617 || || ||||||| || | | || ||||| || || | ||| || | | ||| | Sbjct 15969 CCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTG 15910 Query 139618 GCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTG 139674 | |||||||| | | ||| | | | ||| |||||| | || | ||| Sbjct 15909 GAGACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGC---CTCGGATGCAGTGAATGTTG 15853 Query 139675 ATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATAT 139733 | ||||| || ||| | ||| || | ||||| || | | || ||||| || Sbjct 15852 AGCCCGATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTG-AGGGTGTCGTAGAT 15794 Query 139734 ACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTT 139793 || ||| ||| |||| |||||||||||| ||||| || || | || || ||| Sbjct 15793 GCCATCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGG--GTTG 15736 Query 139794 CGTG--CCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAAT 139851 ||| ||||| || || || || ||||| ||||| | | |||||| | Sbjct 15735 GGTGTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCCGACATGAGG 15676 Query 139852 TCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATC 139911 | ||| || |||||||| |||| |||| ||||| || ||||| | ||||||||| Sbjct 15675 TTGTAAGTGTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCGCATG 15616 Query 139912 AGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCT 139971 ||||||||||| || ||||| ||| ||| | || ||||||| | ||| Sbjct 15615 AGCATATGTTGCGGCCTCTCGGCGACCTTGCCGTTAATGCGCAGCAGATAAGAGCGCTCG 15556 Query 139972 AGGGTCTTGTAGCCAAAGTA 139991 || |||||| |||| ||||| Sbjct 15555 AGAGTCTTGAAGCCGAAGTA 15536 >seq1890 Length=49107 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || || ||||| || ||| | | Sbjct 41801 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCTTCA 41742 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| || || || || || || ||| Sbjct 41741 GACACCATCGACAATGTCAAGACAAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 41682 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| || ||||| || || | | | || || || ||| Sbjct 41681 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTTTCGGACTACAAC 41622 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| |||||||| |||||||| |||| | ||||| ||| Sbjct 41621 ATCCAAAAGGAGTCGACACTCCACTTGGTCCTGCGTCTCCGCGGTGGC 41574 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || || ||||| || || | | Sbjct 42029 ATGCAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCA 41970 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| || || || || || || ||| Sbjct 41969 GACACCATTGACAATGTCAAGACAAAGATCCAGGACAAGGAGGGCATTCCGCCGGACCAA 41910 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| ||||| || ||||| ||||| | | | || || || ||| Sbjct 41909 CAACGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACAAC 41850 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| |||||||| |||||||| | || ||||||| || Sbjct 41849 ATCCAGAAGGAGTCGACACTCCACTTGGTCCTTCGCCTGCGCGGTGG 41803 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || ||| | | Sbjct 46304 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCATCG 46363 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | ||||| |||||||||||||| || || || || || || ||| Sbjct 46364 GACACAATCGACAACGTAAAGACGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAA 46423 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || || || ||||| | | | | || || || ||| Sbjct 46424 CAGCGCCTCATCTTCGCAGGCAAGCAACTTGAGGACGGCCGCACCCTCTCTGACTACAAC 46483 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || ||||| ||||||||| | || | ||||| ||| Sbjct 46484 ATTCAGAAGGAGTCCACACTCCACTTGGTGCTCCGTCTCCGCGGTGGC 46531 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 |||| || || || || || || ||||| ||||| || || || | ||||| | || | Sbjct 46089 TTAAGACTCTTACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCAGACACCATCGACA 46148 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || || |||||||| ||||| || || || ||||| || ||||||||| |||||| Sbjct 46149 ATGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAACGTCTGATCT 46208 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 ||||||| || ||||| ||||| | | | || || || ||||| |||||||| | Sbjct 46209 TTGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACAACATCCAAAAGGAGT 46268 Query 24897 CGACACTACACTTGGT 24912 | || || |||||||| Sbjct 46269 CCACTCTCCACTTGGT 46284 >seq1114 Length=26360 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || ||||| || || | || Sbjct 18967 ATGCAGATCTTTGTGAAGACTCTCACAGGCAAGACGATCACCCTCGAGGTGGAGTCATCC 18908 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || || |||||||||||| || || || ||||| || || Sbjct 18907 GACACGATTGACAACGTCAAGACCAA-GATCCAAGACAAGGAGGGCATCCCTCCGGACCA 18849 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||| | ||||||||||| || ||||| || || ||| |||| || || || Sbjct 18848 ACAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTGTCGGACTACAA 18789 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||||||||| || ||| | || |||| ||||||| || Sbjct 18788 CATCCAGAAGGAATCGACCCTGCACCTCGTCCTGCGTCTGCGCGGCGG 18741 >seq3431 Length=10244 Score = 96.9 bits (106), Expect = 3e-15 Identities = 117/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || || ||||| || || || | Sbjct 1323 GATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCCTC 1264 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||||| | || |||| || || || |||||| ||||| || || || || || || | Sbjct 1263 CGACACCATCGACAACGTCAAGACCAA-GATCCAGGACAAGGAGGGGATCCCCCCGGACC 1205 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 | || || | ||||||||||| |||||||| ||||| Sbjct 1204 AGCAGCGGCTCATCTTTGCCGGAAAACAGCTCGAGGA 1168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449877433340080