Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2057 176 7e-38 seq2146 154 2e-31 seq2959 152 8e-31 seq136 132 8e-25 seq569 127 3e-23 seq1085 113 7e-19 seq3192 107 3e-17 seq2904 105 1e-16 seq3037 98.7 2e-14 >seq2057 Length=22280 Score = 176 bits (194), Expect = 7e-38 Identities = 241/330 (73%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| | |||||| || ||||||||||||||| |||||||| Sbjct 16437 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGACCGCGCTT 16496 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCC-GAGAAAAAGATGCCCTCGACGGCGGCAA 794458 ||||||||| ||||||| | ||| ||| ||||| ||||||||||| |||||||| | Sbjct 16497 CTTGAGCCAGAAGATGG-AGGCAAAGGACCCAGAGAAGAAGATGCCCTCCACGGCGGCGA 16555 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 || ||| | ||||| ||||| ||| | | | | |||||||||| ||| |||| Sbjct 16556 AGGCGATCAATCGCTCAGCAAA--GGTCGATTCGGT-GTCGTTGATCCACCGCATGGCCC 16612 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGT--CCTT 794576 |||| ||||||| | | || || | || || ||||| |||||||| | | || Sbjct 16613 ACTCGGCCTTTTGCTTGACGACAGGGATGGTCTCCATGGCATCAAAGAGGTACTCGCGTT 16672 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 || ||||| | ||| ||||||||||| || ||||| ||||| ||||| ||||| Sbjct 16673 GCTGA--GGGTCGCGAATGTATGTGTCGATGAGCAGAGAGTATGTCTCCGAGTGAATGTT 16730 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || |||||||||||| || ||||| Sbjct 16731 CTCCATCATGATCTGGAAGCCGTAGAAGCA 16760 Score = 107 bits (118), Expect = 3e-17 Identities = 150/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | | |||| |||||| | || || || | |||||||| || || ||| Sbjct 16765 GCCTCTGCTGCTTGCACCTCCGAACTAAACCGCTCGACGAGGTTCTCGTTGACAATACCG 16824 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || || ||||| |||||||||||||| |||||||||||||||| | |||| | | | Sbjct 16825 TCTGATGCTGCGAAGAAGGCGAGGACGTGGCTGATAAAGTGACGCTCATTGTCGTTCAAC 16884 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | | |||| | ||||||| |||||| || ||||| || || Sbjct 16885 TTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTCGATCTCCTCAGCAGTCCAGAACGAT 16944 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| ||||| |||||||| | ||| ||| Sbjct 16945 GCCTCTGCCTTCTTGTACATTTGCCAGATC 16974 Score = 89.7 bits (98), Expect = 8e-12 Identities = 148/213 (69%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 |||||||| ||||| || | || ||||| |||||| | ||| || || | || Sbjct 16153 AAAAAGTTAGTCTTTCCTTGCAGAGAGATGTTCTCCATGAAGTCGAAGGGATTTGTCGCA 16212 Query 793989 AGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTAC 794048 ||||||||||||| ||||| | | ||||| ||||||||||| || || ||||| Sbjct 16213 TTGTAGTGCTTCTCGTTGCCGAGGGCGACCAGCAGTCGGTCGGCGACAAACTCGATGTAT 16272 Query 794049 TGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAAC 794108 |||| ||| || ||||||||||||||| | | ||||||| || ||| || Sbjct 16273 TGGCTCATCAGACGGGCGTTCATGCCGATCAATGAACATGGCAGCGCATCAGTGAGGAAA 16332 Query 794109 TCTTTCTCGATCTCGACGGCCTCG---ATGATG 794138 ||| |||||| ||| || ||| |||||| Sbjct 16333 GCTTGCTCGATGGTGACAGCTTCGCCAATGATG 16365 >seq2146 Length=21837 Score = 154 bits (170), Expect = 2e-31 Identities = 190/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||| || |||| ||| ||||| || |||||||| |||| ||||||||| Sbjct 15967 CTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGA 15908 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||||| || || | ||| | ||| | | | || | ||| | | || Sbjct 15907 GACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGAATGTTGAGCCC 15848 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| ||||||| |||| ||| | ||||| | || || || ||||||||||| || Sbjct 15847 GATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCGTAGATGCCATC 15788 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||||| ||||||| | ||| ||||| || || | || ||| | || || Sbjct 15787 GATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGGTTGGGTGTTCC 15728 Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799 |||||||||||| ||||||| Sbjct 15727 GGCATTGAAGAGGGTGGGCG 15708 Score = 107 bits (118), Expect = 3e-17 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCG 2071859 || ||||| ||| | ||||| | ||||||||| || ||| | || | || || Sbjct 16179 AGACCGGGGCACTCAGCGGGGCACATGAGCGACCACTCTCCGTTCTGTT-CGACTCGCTT 16121 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| |||| |||| |||| ||| |||| ||||| || || || || ||||||||| Sbjct 16120 CATGAACAAGTCGGGAATCCAAAGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTT 16061 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 |||||||||||| | |||||||| | |||| || ||| | |||||| ||||| | ||| Sbjct 16060 GCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTA 16001 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | |||||| || ||| |||||| ||| || Sbjct 16000 GATGGCAAAAGCCCCCGGTCGCTTGTTGCCACC 15968 Score = 86.0 bits (94), Expect = 1e-10 Identities = 95/125 (76%), Gaps = 4/125 (3%) Strand=Plus/Minus Query 2070124 ATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGG 2070183 |||||| || |||||||| || || | || |||| ||| || || |||||||||| | Sbjct 16659 ATCATG---AATGCGTCGGCGAGACCGTTGACTCCGATGCCGATGGGGCGGTGGCGCATG 16603 Query 2070184 TTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 ||||| | | |||||||||||| ||||||| ||| | ||||| | ||||||||| Sbjct 16602 TTCGACTTCTTGGCCTCGGGCACAGGGTAGTAGTTCACATCGATGATCTTGTTGAGGTT- 16544 Query 2070244 GCCAC 2070248 ||||| Sbjct 16543 GCCAC 16539 >seq2959 Length=17512 Score = 152 bits (168), Expect = 8e-31 Identities = 174/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | ||||||||| || |||| ||||||| ||| ||||| ||| | | Sbjct 12387 GTACTTGGTGACCGACTTGGTACCTTCGGAGATGGCGTGCTTGGAAAGTTCACCGGGGAG 12328 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 |||||| || ||||| || ||||||||||||| ||| || |||||| | Sbjct 12327 GATCAGCCGGACGGCCGTTTGGATCTCGCGGGCAGAGATGGTCGACTTCTTGTTGTAGGA 12268 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 || || | |||||||| | ||||||| |||| ||||| | |||||| ||||| | Sbjct 12267 TGCAAGCTTGGAGGCCTCGGAGGCGATGCGCTCGAAGATGTCCTGGACAAAGGAGTTGAG 12208 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||| ||||| || ||||||||||||||||||||| || Sbjct 12207 GATGGCCATGGCCTTGTTTGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGAC 12154 >seq136 Length=32467 Score = 132 bits (146), Expect = 8e-25 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || | ||||||||| || |||| |||||| ||| |||||| || ||| Sbjct 736 GTACTTGGTCACCGACTTGGTACCTTCCGAGATCGCGTGCTTGGACAGTTCACCCGGCAA 795 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||| || ||||| || |||||||| || | | || ||| | |||||| || || Sbjct 796 GATCAACCGAACGGCAGTTTGGATCTCCCGTGCGGAAATGGTGCTCTTCTTGTT-GTACG 854 Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| | || || | ||||||| || | ||||| | || |||||||||| Sbjct 855 ACGCCAGCTTGGACGCTTCCGACGCGATGCGCTCAAAGATGTCTTGCACGAACGAGTTCA 914 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||| | ||||||||||||||| ||| ||||| || ||||| || || Sbjct 915 GGATCGCCATGGCCTTGTTGGAGATGCCCGTGTCTGGGTGGACTTGCTTCAGGAC 969 >seq569 Length=29348 Score = 127 bits (140), Expect = 3e-23 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 2019108 GCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATC 2019167 ||||| ||||| || || ||||| |||||||| || | |||||||| || | | ||| Sbjct 7332 GCCGTCCTCGAGCTGAACGCGTCCGACGAGCGAGGAATCGACGTCGTCCGGAATAAGATC 7391 Query 2019168 AAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTC 2019227 ||| || |||| | || ||| ||||||||||| |||||| | ||||||||| Sbjct 7392 AAGAGCTTTGCCCAAAAAACAGTCACCCTACCGCCCGGCCGGCACAAGCTCATCATCCTC 7451 Query 2019228 GATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAG 2019287 || || |||||| || | || || | ||||||||||| |||||| ||||||||| | Sbjct 7452 GACGAAGCCGACAGCATGACCTCAGGAGCCCAGCAGGCGCTCCGACGGACCATGGAGATC 7511 Query 2019288 TACACCAACACGACGCGGTT 2019307 ||| ||| |||||| || || Sbjct 7512 TACTCCAGCACGACCCGCTT 7531 >seq1085 Length=3933 Score = 113 bits (124), Expect = 7e-19 Identities = 199/286 (70%), Gaps = 7/286 (2%) Strand=Plus/Plus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 || ||||| ||| | || || || |||||||||| |||| |||| || |||||| Sbjct 3159 TCGATCTTCGAGTCCGCGTCCGAGGAGCTCATCTTGGAC-CCTT--TGAGACCGGGCACC 3215 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | | || | ||| ||| ||||||| |||||| ||| |||||| || || Sbjct 3216 ATCTCATTCATCAGATGGGCGCGCTTGGCGTAGCCGAGCTTGGGCAGGATCTCCTCGGCG 3275 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | | | |||||||| ||||||||| || || |||||| |||||| |||||| |||| Sbjct 3276 AGGACGAAGATCTTTCGCTGGTCGACACCTCCGAACTGGAAATCGACGCCGAGGTACTGC 3335 Query 2411566 TCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCATC 2411625 |||||||| || || | |||||||| |||| | ||| ||| | | | || | Sbjct 3336 TCGTCGAGCGCTTGGAGACCCGGGTAGATGAGGCCGGAGAGTAGCGCGCTCGAGACCTGC 3395 Query 2411626 TTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGCCGACGGTCAC 2411669 || ||||||| |||| |||| | || ||| ||||| ||||||| Sbjct 3396 TTCACCACCTCGGCGCCGGCTTTCTTGGCGTCGTGC--TCGGTCAC 3439 >seq3192 Length=13222 Score = 107 bits (118), Expect = 3e-17 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 ||||| ||||| ||||||||| ||||||||| |||||| || | | ||| || | Sbjct 1272 CCCGAAAGCCGTGGCTTTGTGGAGAACTCGTACCTGCGCGGTCTGACCGCGCAGGAATTC 1331 Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141 || | ||| || | ||| || || ||||| | |||||||| ||||||||||| ||| Sbjct 1332 TTCTTCCACGCCATGGCCGGTCGGGAAGGTCTGATTGACACGGCTGTCAAGACGGCTGAG 1391 Query 431142 ACGGGCTACATCCAGCGTCGGTGCATCAA 431170 ||||||||||||||||| || | ||||| Sbjct 1392 ACGGGCTACATCCAGCGCCGCTTGATCAA 1420 Score = 100 bits (110), Expect = 5e-15 Identities = 207/306 (68%), Gaps = 14/306 (5%) Strand=Plus/Plus Query 429519 GGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCG 429578 || |||| |||||||||||| || | |||||| | || | ||||||||||| Sbjct 174 GGCTGGATCGTCGAGCGCCATCTCAAGAATGGCGACTTTATCCTCTTCAACCGGCAGCCT 233 Query 429579 TCGCTCCACATGGGGTCGATGCTCAACCA------CAAGGTGGTGCCC-ATGCCCGGTCG 429631 |||||||||| | | ||| | ||| |||| | || | || ||| Sbjct 234 TCGCTCCACAAGATGAGCATGATGTGCCATCGCATCAAGATTATGAACTAT------TCG 287 Query 429632 CACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGA 429691 ||||||||||||||||| | || ||| | ||||| |||||||||||||||||||| Sbjct 288 -ACCTTCCGGCTCAACCTTTCGGTCACGCCTCCGTACAATGCCGACTTTGACGGCGACGA 346 Query 429692 GATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTCGCCCACACCATGGG 429751 ||||||| |||| || || ||| ||| | | || || || || ||| | | | Sbjct 347 GATGAACTTGCATGTACCGCAGAGCGAGGAGACCCGAGCTGAGCTCAGCCAGATCGCCTG 406 Query 429752 CGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCGTGATGGA 429811 || || | || ||||| |||||||| ||||||||| | || || ||||| ||| Sbjct 407 GGTCGCGCGGAACATTGTGTCCCCGCAGGCGAACAAGCCCGTGATGGGCATCGTGCAGGA 466 Query 429812 CGCCCT 429817 | |||| Sbjct 467 CACCCT 472 >seq2904 Length=19125 Score = 105 bits (116), Expect = 1e-16 Identities = 157/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 429509 GCTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAA 429568 ||||| ||||| ||||||||||||||| ||||| ||||||| ||| || | || Sbjct 2266 GCTCCGCATCGGAGATACCGTCGAGCGCCACTTGCGCGACGGCGACATCGTCCTCTTCAA 2207 Query 429569 CCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGG 429628 ||||||||| || || |||| | ||| || | | |||| | | | |||| | Sbjct 2206 CCGGCAGCCCTCCCTGCACAAGTTGTCTATCATGAGCCACCGCGCCAAGATCCGGCCCTG 2147 Query 429629 TCGCACCTTCCGGCTCAACCTGGCCGTGACGG--GCACCTACAACGCCGACTTTGACGGC 429686 ||||| ||||| | ||| | ||| | | | ||||||| ||||||||||| || Sbjct 2146 GCGCACGTTCCGCTTGAACGAGT--GTGCCTGTGGACCCTACAATGCCGACTTTGATGGG 2089 Query 429687 GACGAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACG 429727 |||||||||||| ||||||| |||||| | ||| ||| || Sbjct 2088 GACGAGATGAACATGCACGTACCCCAGACCGAGGAGGCTCG 2048 >seq3037 Length=15803 Score = 98.7 bits (108), Expect = 2e-14 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | |||||||||||| |||| ||||||| || |||||| ||| | | Sbjct 12935 GTACTTGGTGACCGACTTGGTACCCTCGGAGATGGCGTGCTTGTACAGTTCACCGGGGAG 12876 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 |||||| || ||||| || ||||||||||||| Sbjct 12875 GATCAGCCGGACGGCCGTTTGGATCTCGCGGG 12844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915864940824254