Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1114 141 2e-28 >seq1114 Length=26360 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | || |||||| || | |||||| || ||||| ||||| || || || || || Sbjct 18740 ACCGCCGCGCAGACGCAGGACGAGGTGCAGGGTCGATTCCTTCTGGATGTTGTAGTCCGA 18799 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||| |||||||| || || || || |||||||| || | ||||| || ||||| Sbjct 18800 CAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGTTGGTCCGGAGG 18859 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| ||||| ||||| | || || || |||||||| || | || || Sbjct 18860 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGATGACTCCAC 18919 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 || | || |||||||||||||| | ||||| ||||| |||||||| || Sbjct 18920 CTCGAGGGTGATCGTCTTGCCTGTGAGAGTCTTCACAAAGATCTGCATGAT 18970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981782089335654