Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2146 98.7 9e-16 seq1114 84.2 2e-11 >seq2146 Length=21837 Score = 98.7 bits (108), Expect = 9e-16 Identities = 914/1462 (63%), Gaps = 55/1462 (4%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| ||||| |||||||| ||||||||||| | | |||| ||||| ||| ||||| Sbjct 17031 TTGACGACTTGGAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGCTCGTGTAAGGC 16972 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 ||||| |||| || ||| | || || ||| | || || ||||| || | | Sbjct 16971 TCAAAGCACTCGTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCATAGGTGCGAGC 16912 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 |||| || || || ||||||| || |||||| ||| | ||||||||| Sbjct 16911 AACAGCGAGTTCCGAAGACCGTGCGAGGCAATGTTGCGCTTGATCTCAGCCCAGTCCCAA 16852 Query 147073 ATCGAC--GAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGAC 147130 | ||| ||| || ||| ||||||||||||||||||| | || ||||| || | Sbjct 16851 A--GACCGCTGGGGGTAACGCCCCACATGTCGTACTGGAGCTCGCCCTTGCTGGCCGGGC 16794 Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCG 147190 ||| || | || |||| | ||| || || | || || | ||| || | Sbjct 16793 AGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCAAGCTCGCACGATCGCTCAAGAG 16734 Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250 | | | ||| ||||| ||| ||| || |||| || | || || || || Sbjct 16733 CGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTCGGGACTGTC-A 16675 Query 147251 AAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 ||||| || | || | || || || ||||| | ||| | || |||| |||||| || Sbjct 16674 AAGGCGTAGCCCATGATCATGAATGCGTCGGCGAGACCGTTGACTCCGATGCCGATGGGG 16615 Query 147310 CGATG----CTTTTCG-TTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAA 147364 || || | |||| | || || ||| || | || |||| ||| ||| | Sbjct 16614 CGGTGGCGCATGTTCGACTTCTTGGCCTCGGGC-----ACAGGGTAGTAGTTCACATCGA 16560 Query 147365 TAATCTTGTTGAGGTTACGCAC-TACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423 | |||||||||||||| | ||| || || || || | | || |||| ||| ||| Sbjct 16559 TGATCTTGTTGAGGTTGC-CACAGACGACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCA 16501 Query 147424 TAAGTCC-CGTCTT------CGACACGT-ACGCA--TTGGT--TCACGGCGATAGACGCC 147471 || |||| ||| || ||| ||| | | | | ||| || || ||| || Sbjct 16500 TATGTCCTCGTGTTGGTTTGCGAGTCGTAATGGATGTAGGTCGGCAGAGCCATACTGGCA 16441 Query 147472 AGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTG 147531 || |||||||| || ||| || | ||||||||| | ||| || | ||| ||||| Sbjct 16440 AGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGATCTCCGTGCAAAGGTTA 16381 Query 147532 CTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAG 147591 | || ||| || | || | ||| || || || ||| ||||| ||| | Sbjct 16380 GAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTAA 16321 Query 147592 AGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTC---AACGATAAACCTATGCAGGTCC 147648 |||||| | || ||| ||||| || | || |||| ||| || | | Sbjct 16320 AGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGGCGTACC---AGAGCTTC 16264 Query 147649 TGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCA 147708 || || ||| | ||| || |||||| |||||| |||||| | ||| Sbjct 16263 TGAGCCTTGACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTTCTCGTAGAGGGCCTCG 16204 Query 147709 AACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCAC 147768 || || || || ||| |||||||| ||||| |||| | || ||||| ||||||||| Sbjct 16203 AATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCACATGAGCGACCAC 16144 Query 147769 ATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGA 147828 ||| | | || || ||| |||| || || | ||| || ||||| | || Sbjct 16143 TCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAGGGCGTAGAAGAGC 16084 Query 147829 TCGCGCGCTTTGCAA---TCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATA 147884 || || || || | ||||| ||| ||| | | | | | || | | | Sbjct 16083 TCACGGGC---GCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGA-A 16028 Query 147885 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCC 147941 || ||| | |||||| || |||||||||| ||| | || || ||| || || || Sbjct 16027 GACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTTGTTGCCACC 15968 Query 147942 CTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGC 148001 ||||||||| | ||| | ||||||| || || || | |||||| | | |||| | | Sbjct 15967 CTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGA 15908 Query 148002 AGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCC 148061 ||||||||| | || | |||| | |||| | ||| | ||| | || Sbjct 15907 GACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGAATGTTGAGCCC 15848 Query 148062 AATGCCGCC-GCCGTACTT--TGAT-ATGGCAGCGCAATCGCCCAATGTCGTGTAGATGC 148117 ||||| || ||||| ||| |||| ||| |||||| | || |||||||| Sbjct 15847 GATGCCACCGGCCGT-CTTGCTGATCATG---GCGCAAGTCTTGAGGGTGTCGTAGATGC 15792 Query 148118 CGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCG 148177 | |||||| ||| | || | | || || || || |||| || || | | | Sbjct 15791 CATCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGGTTGGGTG 15732 Query 148178 TTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGAT 148237 |||| || ||| |||||||| ||||| || || | || | ||| | | | Sbjct 15731 TTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCCGACATGAGGTTGT 15672 Query 148238 ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCA 148297 | || || || || | || ||||| ||||||||||| | ||||| |||||||||| Sbjct 15671 AAGTGTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCGCATGAGCA 15612 Query 148298 TGTGCTGTGGTCGTTCGGCAAC 148319 | || || || | ||||| || Sbjct 15611 TATGTTGCGGCCTCTCGGCGAC 15590 >seq1114 Length=26360 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || || ||||||||||| || || || ||||||||||| || |||| | Sbjct 18774 GATTCCTTCTGGATGTTGTAGTCCGACAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCA 18833 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||||||||| || ||||| ||||| || || || || || || | Sbjct 18834 AAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACG 18893 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | |||||| |||| || | ||| || || || ||||| || Sbjct 18894 TTGTCAATCGTGTCGGATGACTCCACCTCGAGGGTGATCGTCTTGCCTGTGAGAGTCTTC 18953 Query 132110 ATGAAAATCTGCATGA 132125 | || |||||||||| Sbjct 18954 ACAAAGATCTGCATGA 18969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476589835902960