Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1466 86.0 7e-12 >seq1466 Length=3011 Score = 86.0 bits (94), Expect = 7e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 |||| |||||| || |||| | |||| ||||||||||| |||| | | ||| | || Sbjct 2359 TTCAAGGGCTCGACATGGTCGCGGTACACGTGCGCGTCGCCCATGCTCAACACGAGCTCG 2300 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || | || | | || || || |||||||||| || | || | |||||||| ||| Sbjct 2299 CCGGCCTCGCAGTCCGTGACCTGTGCCACCATGTGCGTCAAGAGAGCATAGCTGGCAATG 2240 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||||| || || || || |||| || | || | |||||||| |||||| Sbjct 2239 TTGAAAGGAACGCCGAGTCCCAAATCGCAGGAGCGCTGGTACATCTGGCA 2190 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 ||||| || ||||| |||||| |||||| || | ||||| || ||| | || |||||| Sbjct 1931 AGCTGATCGACGCCTTGGCCCGTGTAGTTGGTGTCACAGTCGACATACTTTGCGCCAAAG 1872 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 |||| ||| ||||||||||| || || || || ||||| Sbjct 1871 TGCCGCCATTGGAAGCCGTAGACAGGTCCGAGATCGCC 1834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583461845150400