Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3431 111 1e-19 seq2921 105 6e-18 seq1890 95.1 1e-14 >seq3431 Length=10244 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| ||| | || |||||||| || |||||||| ||| || || || |||| || Sbjct 1114 ACCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGTCCGTCCTCG 1173 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| || || ||||| || | |||||||||||||| || | | |||||||||| | Sbjct 1174 AGCTGTTTTCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGG 1233 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | |||| | | |||||| || |||||||| | |||||||| || Sbjct 1234 ATCTTGGTCTTGA-CGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATCGTCTT 1292 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || || || |||||||| Sbjct 1293 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 1322 >seq2921 Length=71014 Score = 105 bits (116), Expect = 6e-18 Identities = 145/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || |||| || |||||||| || || || Sbjct 18142 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 18201 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | |||||||||| |||||| ||| | || Sbjct 18202 GATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGT 18260 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| || |||||||| | |||||||| || ||||| | || || | Sbjct 18261 TGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 18320 Query 35724 CAAATATCTGCATTCTGTGC 35743 | || |||||||| ||| || Sbjct 18321 CGAAAATCTGCATGCTGGGC 18340 >seq1890 Length=49107 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| ||||||||||| || | | ||| || |||| || Sbjct 46513 CACCAAGTGGAGTGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTC 46454 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || ||||| || || || || | ||||| ||||||| |||| || ||||||||| Sbjct 46453 AAGTTGCTTGCCTGCGAAGATGAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTG 46394 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||| | |||| | | ||||| ||||| ||||| | ||||| || | Sbjct 46393 GATCTTCGTCTTTA-CGTTGTCGATTGTGTCCGATGATTCAACCTCGAGGGTGATGGTCT 46335 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || |||||||| Sbjct 46334 TGCCGGTCAGGGTCTTGACGAAGATCTGCAT 46304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450773393176880