Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2146 179 5e-40 seq2057 82.4 1e-10 >seq2146 Length=21837 Score = 179 bits (198), Expect = 5e-40 Identities = 544/831 (65%), Gaps = 11/831 (1%) Strand=Plus/Minus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 ||||| ||||| ||| ||| | | ||||||||| || || || || | ||| || Sbjct 16437 TTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGATCTCCGTGCAAAGGTTAGAG 16378 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370 |||| || || || | ||||| ||||| ||| |||| || |||||||| ||| Sbjct 16377 TTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTAAAGC 16318 Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGC 111429 ||| | || | || ||||||||||| | | |||| || | ||| | | || | | | Sbjct 16317 ATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGGCGTACCAGAGCTTCTGAGCC 16258 Query 111430 TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 111489 | | || || | || || ||||| ||||||||| ||||||||| || || || Sbjct 16257 TTG-ACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTTCTCGTAGAGGGCCTCGAATTC 16199 Query 111490 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 111549 |||||| |||||| ||||| || || | || || | || ||||| | || Sbjct 16198 CTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCACATGAGCGACCACTCTCC 16139 Query 111550 ACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT 111609 | || || ||||||||||| | ||| |||||||| |||| | ||||| || | Sbjct 16138 GTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAGGGCGTAGAAGAGCTCACG 16079 Query 111610 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 111669 ||| |||| || | || ||||| | | || |||||||| | || |||| Sbjct 16078 GGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCCGA 16019 Query 111670 GTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTAC 111726 |||||| ||||||| |||| || | || ||| ||| ||| | || | || Sbjct 16018 GTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTTGTTGCCACCCTGGTCGAC 15959 Query 111727 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 111786 ||||| || ||| ||| || || |||||||| |||| ||| || | || || || Sbjct 15958 GTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGAGACGCCGTT 15899 Query 111787 TGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 111846 || || ||| ||| || ||| | || |||| | ||| || || || Sbjct 15898 GGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGAATGTTGAGCCCGATGCCACC 15839 Query 111847 AGCCCACTT--TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 111904 ||| ||| ||| | ||||| | | | | || || | ||||| || | ||| ||| Sbjct 15838 GGCCGTCTTGCTGATCATGGCGCA-AGT-CTTGAGGGTGTCGTAGATGCCATCGATGGAG 15781 Query 111905 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 111964 || ||||| | | || |||||||| |||||||| || | ||||| || |||||| Sbjct 15780 TCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGGTTGGGTGTTCCGGCATTG 15721 Query 111965 AAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAA 112023 |||||||| || | ||||| |||| ||| | | ||||| || ||| || || | Sbjct 15720 AAGAGGGTGGGCGAGGCGTGGGTGAA-GTACTTCTCCGACATGAGGTTGTAAGTGTCGAT 15662 Query 112024 GACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACAT 112074 | | |||||||| |||||| ||||||| ||||| ||||||| ||| Sbjct 15661 GGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCGCATGAGCAT 15611 >seq2057 Length=22280 Score = 82.4 bits (90), Expect = 1e-10 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| |||||| || || || || ||||| || || Sbjct 16420 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAACGTGAGGCCG 16479 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||| | ||| | || | | || ||||| ||||||||||| Sbjct 16480 GGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGACCCAGAGAAGAAGATG 16539 Query 122779 CCCTCCAC 122786 |||||||| Sbjct 16540 CCCTCCAC 16547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628003848465600