Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2146 230 3e-55 seq2057 131 2e-25 seq2957 87.8 2e-12 >seq2146 Length=21837 Score = 230 bits (254), Expect = 3e-55 Identities = 1122/1758 (64%), Gaps = 59/1758 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||| |||||||||| | ||||| ||||||| |||| | ||||| || Sbjct 17337 CGGAGGTAGTACGTCCCCGTCTTCAACCCCTTCTTCCAGCCATAGAAGTGCATGCTGGT- 17279 Query 117897 AACTTGGAGAGGGTTGGACT-TTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 || |||| | | | | | || || || ||||| ||||||||| || |||||| Sbjct 17278 AAGTTGGCCAAAGCTCGGCGCTTGCAGATGGATGTTCAGACTTTGGGACTGGCAGATGAA 17219 Query 117956 -GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCC 118014 ||| ||||| ||||| ||||| ||||| | ||||| | ||| ||||| || ||| Sbjct 17218 AGCG-CCCCGGTCCGCGGCCATGTCAATGATGACCTTCTGCGAGATCTCCCAGACCGTCT 17160 Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACC---CG 118071 |||| || ||| || || || || | | ||| || || || || || || Sbjct 17159 TGTACAGCGCCTTGATCCGGTCCGGAATCCCGGGCACATTCTGAATCGAGCCGCCATGCG 17100 Query 118072 CCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 118131 | ||| | | | |||||| | || ||| || || || ||| || | Sbjct 17099 CTATGATCCGG---TTCTTCATCTGCTCGTTCCACAGCCCTTGCTCGACGAGCTCGCGGA 17043 Query 118132 CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 118191 || | ||||| || ||||| || || || || | || | ||| Sbjct 17042 GCAGCCACGGGTTGACGACTTGGAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGC 16983 Query 118192 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 118251 ||||||| |||||||||||||| ||| |||| ||| || || ||||| || |||| Sbjct 16982 TCGTGTAAGGCTCAAAGCACTCGTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCA 16923 Query 118252 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGT 118311 | ||||| | | || ||| || ||||| | |||| ||||| | Sbjct 16922 TAGGTGCGAGCAACAGCGAGTTCCGAAGACCGTGCGAGGCAATGTTGCGCTTGATCTCAG 16863 Query 118312 CCCAGTCGTAGTTGA--GCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 118369 ||||||| | || ||| | | | | |||||| || ||||||| || | Sbjct 16862 CCCAGTCCCAAA-GACCGCTGGGGGTAACGCC-CCACATGTCGTACTGGAGCTCGCCCTT 16805 Query 118370 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC---GCCAATTCGGA 118426 | || || | ||||| ||||||| || || || | | |||| || | ||| | Sbjct 16804 GCTGGCCGGGCAGCCCTCGTATGTCTCGTA--GGTCC-CGAGCTCCTTGGCAAGCTCGCA 16748 Query 118427 -GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGG 118485 | |||| || || || ||||| || || || || || || || || | ||||| Sbjct 16747 CGATCGC-TCAAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGG 16689 Query 118486 CCTCGTCGGAAT--CAAACGCG-AGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGG 118541 ||||| ||| | |||| ||| || | || | || ||| | || |||||||| | | Sbjct 16688 CCTCG--GGACTGTCAAAGGCGTAGCC--CATGATCATGAATGCGTCGGCGAGACCGTTG 16633 Query 118542 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGA 118598 || |||| ||| || ||||| || | ||| || |||||| || ||| ||| || Sbjct 16632 ACTCCGATGCCGATGGGGCGGTGGCGCATGTTCGACTTCTTGGC---CTCGGGCACAGGG 16576 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 || | ||| |||||| | | | || || || ||| ||||| |||| || ||| Sbjct 16575 TAGTAGTTCACATCGATGATCTTGTTGAGGTTGCCACAGACGACCTTGGTGACCTCGTGA 16516 Query 118659 AGCTTTTCGTAATCAAAACT--------------GCGAGTCTCTTCATTGACATACTTAG 118704 ||||| | | | ||| | | ||||||| | || || || | | Sbjct 16515 AGCTTCTTGAAGTCATATGTCCTCGTGTTGGTTTGCGAGTCG--TAATGGATGTAGGTCG 16458 Query 118705 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 118764 | || || || || || || || |||| | ||| ||| | | |||||||||| | Sbjct 16457 GCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGA 16398 Query 118765 TTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824 | |||||||| | ||| || |||| |||||||| | |||||| || || ||||| || Sbjct 16397 TCTCCGTGCAAAGGTTAGAGTTCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGT 16338 Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884 | || ||||||||||||||| | || | || |||||||| |||| || |||| | Sbjct 16337 TGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGG 16278 Query 118885 CCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 | | ||||| | || | ||| || ||| | || || ||||| ||||||||| Sbjct 16277 CGTACCAGAGCTTCTG-AGCCTTGACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTTC 16219 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 ||||||||| || || || ||||| | | || | || || || || | | ||| Sbjct 16218 TCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGG 16159 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 || | ||| ||||| | || || || || ||||||||||| | ||| || ||||| Sbjct 16158 CACATGAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAA 16099 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 || || ||||||| || || |||| | || || | || || || | | || Sbjct 16098 AGGGCGTAGAAGAGCTCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 16039 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG- 119182 | || || | || |||| |||||| || || | ||| | || | | |||| || Sbjct 16038 AGGAACTCGAAGACGTCCGAGTGCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGC 15979 Query 119183 --ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 ||| |||||| || || | || ||| ||| || || |||||||| |||| Sbjct 15978 TTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACA 15919 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300 || || | ||| ||| || || || ||| ||| || ||| || ||| Sbjct 15918 ATGCCGTTGGAGACGCCGTTGGTTCCAGCAATGTAAGAGCCGGTGCCTCGGATGCAGTGA 15859 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 |||| | || || || || ||| ||| ||| ||||| | |||| || || Sbjct 15858 ATGTTGAGCCCGATGCCACCGGCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTCG 15799 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 ||||| |||||||| |||||| |||| | | || ||||||||| ||||| || || Sbjct 15798 TAGATGCCATCGATGGAGTCATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGG 15739 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 119479 ||||||| || || |||||||| || || | |||||| |||| ||| | | ||||| Sbjct 15738 TTGGGTGTTCCGGCATTGAAGAGGGTGGGCGAGGCGTGGGTGAA-GTACTTCTCCGACAT 15680 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 || ||| || || | | | | |||||| ||||||||| |||| | ||| || Sbjct 15679 GAGGTTGTAAGTGTCGATGGCCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCG 15620 Query 119540 CATAAACATGTATTGGGG 119557 ||| | ||| | ||| || Sbjct 15619 CATGAGCATATGTTGCGG 15602 >seq2057 Length=22280 Score = 131 bits (144), Expect = 2e-25 Identities = 189/259 (73%), Gaps = 6/259 (2%) Strand=Plus/Plus Query 130002 TGAAGAGTTC-CACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTC 130060 |||||||| |||| |||| || ||| ||||||||||| ||| |||||| || || Sbjct 16406 TGAAGAGTAGGCACG-CAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTG 16464 Query 130061 GAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAG 130120 ||||| || || ||||||||||| |||||||| | |||||| || | ||| || Sbjct 16465 GAGAACGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAC 16524 Query 130121 CCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGG 130180 |||||||||||||| |||||||| ||||| || | | ||||||||||||| || Sbjct 16525 CCAGAGAAGAAGATGCCCTCCACGGCGGCGAAGGCGATCAATCGCTCAGCAAAGG-TCGA 16583 Query 130181 GACTTTGT-ATCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGA-TACACGGGACGG 130238 | ||| | | |||| ||| ||||||| ||||||| || || ||| |||| || Sbjct 16584 TTCGGTGTCGTTGATCCACCGCATGGCCCACTCGGCCTTTTGCTTGACGACA-GGGATGG 16642 Query 130239 TCTGGATCGCTTCAAAGAG 130257 ||| || || |||||||| Sbjct 16643 TCTCCATGGCATCAAAGAG 16661 >seq2957 Length=17564 Score = 87.8 bits (96), Expect = 2e-12 Identities = 214/315 (68%), Gaps = 16/315 (5%) Strand=Plus/Minus Query 179808 ATCCGTCATAATCATAAGCCGACCATAGCGAAG-CTCGGAAACATCTTGATAATCCTTAC 179866 ||||||||| ||||| | | ||||| || || || | | ||| ||| | || Sbjct 10940 ATCCGTCATGATCATCAAGCTTCCATATCGCAGACTTTCGACCGAGTTG-TAAACTTTTG 10882 Query 179867 CTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGAG 179921 | ||||| || ||||| |||| ||||| | |||| ||| ||| ||||| | | Sbjct 10881 CGTGTTGGAGGCCCAAAATCTCCTTGATGTGCTTGATCTCGGCGTTCTTCATGATG-GCG 10823 Query 179922 TTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTA 179981 | | | |||||| || ||||| || || ||||| | |||||||| || | Sbjct 10822 TCGTG----TGAAGCTTCGCGGACGTTAAGCAGTTTTCCACGTAAGGGGAACACTCCCCA 10767 Query 179982 GTGATCACGACCAACCACAGAGAGACCAGCAACTGC-GAGGGTCTTCGCGGAATCACCCT 180040 || || || || || || || |||||| | || || || | | || || || || |||| Sbjct 10766 GTTGTCGCGTCCGACGACGGAAAGACCACCGACAGCAGATGCT-TTGGCTGAGTCTCCCT 10708 Query 180041 CCGTCACGATGAGCGTACACTTTCCAGATTGTGC-CGTCCCTGCCTTGTTCGCGTCGTCC 180099 |||||| ||| ||||| || | || | || | | |||||| || ||||||||||| || Sbjct 10707 CCGTCAGGATCAGCGTGCAGTCACC-GCTTTTCCTCGTCCCCGCATTGTTCGCGTCTTCA 10649 Query 180100 AACTTGGGAATACCA 180114 | ||||||||| ||| Sbjct 10648 AGCTTGGGAATGCCA 10634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618407478642160