Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2146 178 2e-39 seq2057 123 3e-23 >seq2146 Length=21837 Score = 178 bits (196), Expect = 2e-39 Identities = 523/794 (66%), Gaps = 13/794 (2%) Strand=Plus/Plus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| || ||| |||| ||||| ||| |||||||| | | | || || Sbjct 15611 ATGCTCATGCGAGTCGCCGTCGGCATTCACGGGCGGGACATTGACCAGGCCATCGACACT 15670 Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 ||| || ||||| | | ||| |||| ||||| | || |||||||||||||| || Sbjct 15671 TACAACCTCATGTCGGAGAAGTAC-TTCACCCACGCCTCGCCCACCCTCTTCAATGCCGG 15729 Query 104350 TACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 104409 ||||| | ||||| ||||| |||||||| || | | ||||| ||||| ||| | Sbjct 15730 AACACCCAACCCCCAGATGTCATCCTGCTTCCTGGTCACGATGAAGGATGACTCCATCGA 15789 Query 104410 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA--AAGTGGGCTGGGGGTATT 104467 || ||||| | || || | | | | ||||| | ||| ||| ||| || || || Sbjct 15790 TGGCATCTACGACACCCTCAAG-ACT-TGCGCCATGATCAGCAAGACGGCCGGTGGCATC 15847 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527 ||| | |||| || | ||| || ||| ||| || || || || Sbjct 15848 GGGCTCAACATTCACTGCATCCGAGGCACCGGCTCTTACATTGCTGGAACCAACGGCGTC 15907 Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587 || | || ||| |||| |||||||| || || ||| ||| || ||||| || | || Sbjct 15908 TCCAACGGCATTGTTCCCATGCTTCGAGTCTTCAACAACACCGCTCGCTACGTCGACCAG 15967 Query 104588 GCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATC 104644 | ||| ||| ||| || | || |||| ||||||| |||||| |||| || Sbjct 15968 GGTGGCAACAAGCGACCGGGGGCTTTTGCCATCTACATTGAGCCTTGGCACTCGGACGTC 16027 Query 104645 ATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTC 104704 | |||||||| || | | ||||| || | ||||||| || ||| || ||| Sbjct 16028 TTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGTGAGCTC 16087 Query 104705 TTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGG 104764 |||| ||| || |||||||| || | ||||||||| |||| || ||| || | ||| Sbjct 16088 TTCTACGCCCTTTGGATTCCCGACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGG 16147 Query 104765 TCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAA 104824 || ||| | || || | || || ||||| |||| | | |||||||| || || Sbjct 16148 TCGCTCATGTGCCCCGCTGAGTGCCCCGGTCTTGCCGACGTCTATGGTGAGGAATTCGAG 16207 Query 104825 GCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGA-CTGCGACGGTGCCAGCTGCCGA 104883 ||||| ||| ||||||||| || ||||| || | || ||||| ||| | || Sbjct 16208 GCCCTCTACGAGAAGTACGAGCGCGAGGGTCGTGCTCGCCGC-ACGGTCAAGGCT-CAGA 16265 Query 104884 TG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACA 104942 | | ||| | || |||| || | || || |||||||| | || | ||||||||||| Sbjct 16266 AGCTCTGGTACGCCGTTCTGGAGGCCCAGACGGAGACTGGCAACCCTTTCATGCTTTACA 16325 Query 104943 AAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATC 105002 | ||||| |||| ||| || || ||||| | || ||||||| || || | Sbjct 16326 AGGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCACCATCAAGAACTCTAACC 16385 Query 105003 TCTGTACAGAAATC 105016 | || || || ||| Sbjct 16386 TTTGCACGGAGATC 16399 >seq2057 Length=22280 Score = 123 bits (136), Expect = 3e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||||||||||||| | |||| || || || ||||| |||||||||||||| |||| Sbjct 16579 CCTTTGCTGAGCGATTGATCGCCTTCGCCGCCGTGGAGGGCATCTTCTTCTCTGGGTCCT 16520 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 | | | || | |||||||||||||| ||||||||||| || ||| |||||||||| Sbjct 16519 TTGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACGTTCTCCAACG 16460 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 |||| ||| || |||||||| || ||| || |||||| Sbjct 16459 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCG 16419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583234655334640