Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3431 168 2e-36 seq2921 168 2e-36 seq1890 163 7e-35 seq1114 159 8e-34 seq2019 95.1 3e-14 seq2891 86.0 2e-11 seq833 86.0 2e-11 >seq3431 Length=10244 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || |||||||||||||||||||| ||| ||| Sbjct 1319 CAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCCTCCGAC 1260 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 1259 ACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGGATCCCCCCGGACCAGCAG 1200 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||||||||||||||| || ||| |||| || ||| || ||| || Sbjct 1199 CGGCTCATCTTTGCCGGAAAACAGCTCGAGGACGGACGGACGCTGAGCGACTACAACATC 1140 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || Sbjct 1139 CAGAAGGAGAGCACCCTTCATCTGGT 1114 >seq2921 Length=71014 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || |||||||||||||||||||| || ||| Sbjct 18330 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTCGAGGTGGAGTCTTCCGAC 18271 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct 18270 ACGATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCAGCAG 18211 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | |||||| | || || ||| || Sbjct 18210 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAACATC 18151 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 18150 CAGAAGGAGTCGACCCTCCACCTCGT 18125 >seq1890 Length=49107 Score = 163 bits (180), Expect = 7e-35 Identities = 155/197 (79%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||||||||| || |||||| |||||||| Sbjct 42246 CGTTAAGACTCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCAGATACCATCGA 42187 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 |||||||| ||||| |||||||| || || |||||||||||||| || || || || Sbjct 42186 CAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTCAT 42127 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 |||||||||||| ||||| || ||||| | || ||| |||| || ||| ||||||| || Sbjct 42126 CTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTTTCCGACTACAACATCCAAAAGGA 42067 Query 178112 ATCAACACTGCATCTTG 178128 || || || || |||| Sbjct 42066 GTCGACCCTCCA-CTTG 42051 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| ||| |||||| Sbjct 41798 CAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCTTCAGAC 41739 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||| |||||||| || || || || |||||||| || Sbjct 41738 ACCATCGACAATGTCAAGACAAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAG 41679 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| ||||| || ||||| ||||| || | |||||| | || || ||| || Sbjct 41678 CGCTTGATCTTTGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTTTCGGACTACAACATC 41619 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || ||||| || |||| Sbjct 41618 CAAAAGGAGTCGACACTCCA-CTTG 41595 Score = 145 bits (160), Expect = 2e-29 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| || |||||| Sbjct 42026 CAGATCTTCGTCAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCAGAC 41967 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||| |||||||| || || || || |||||||| ||| Sbjct 41966 ACCATTGACAATGTCAAGACAAAGATCCAGGACAAGGAGGGCATTCCGCCGGACCAACAA 41907 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||||| || || || | || || |||| || ||| || Sbjct 41906 CGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACAACATC 41847 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || ||||| || |||| Sbjct 41846 CAGAAGGAGTCGACACTCCA-CTTG 41823 Score = 140 bits (154), Expect = 8e-28 Identities = 150/197 (76%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || || ||||||||||| || ||||||||||||||| Sbjct 46087 CGTTAAGACTCTTACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCAGACACCATCGA 46146 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 || ||||| ||||| |||||||| || || || ||||||||||| ||||| || || Sbjct 46147 CAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAACGTCTGAT 46206 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||| ||||| || ||||| || || || | || || |||| || ||| ||||||| || Sbjct 46207 CTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACGCTCTCCGACTACAACATCCAAAAGGA 46266 Query 178112 ATCAACACTGCATCTTG 178128 || || || || |||| Sbjct 46267 GTCCACTCTCCA-CTTG 46282 Score = 109 bits (120), Expect = 1e-18 Identities = 148/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| ||| || ||| Sbjct 46307 CAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCATCGGAC 46366 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| || ||||| || || || || |||||||| || Sbjct 46367 ACAATCGACAACGTAAAGACGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAG 46426 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || || || || || || | || || | || || ||| | Sbjct 46427 CGCCTCATCTTCGCAGGCAAGCAACTTGAGGACGGCCGCACCCTCTCTGACTACAACATT 46486 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || ||||| || |||| Sbjct 46487 CAGAAGGAGTCCACACTCCA-CTTG 46510 >seq1114 Length=26360 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||||||||||| || |||||||||||||||||||| || ||| Sbjct 18964 CAGATCTTTGTGAAGACTCTCACAGGCAAGACGATCACCCTCGAGGTGGAGTCATCCGAC 18905 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| || ||||| || || |||||||||||||| || Sbjct 18904 ACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAG 18845 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||||||||| || | || || | || || ||| || Sbjct 18844 CGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTGTCGGACTACAACATC 18785 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || ||||| || || Sbjct 18784 CAGAAGGAATCGACCCTGCACCTCGT 18759 >seq2019 Length=1993 Score = 95.1 bits (104), Expect = 3e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 68750 TCTTGCCGCTGCCATCGAGTACATCATCGCCGAGATCCTTGAGCTTGCCGGAAACGCCGC 68809 |||||| || | | |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 1059 TCTTGCTGCCGTCCTCGAGTACCTCACAGCCGAGATCCTTGAGCTTGCCGGAAACGCCGC 1118 Query 68810 TCGTGACTCAAAGAAGG 68826 ||||||| ||||||| Sbjct 1119 TCGTGACAACAAGAAGG 1135 >seq2891 Length=19366 Score = 86.0 bits (94), Expect = 2e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 68750 TCTTGCCGCTGCCATCGAGTACATCATCGCCGAGATCCTTGAGCTTGCCGGAAACGCCGC 68809 |||| |||| | | |||||||| ||| |||||||||||||||||||| ||||| ||||| Sbjct 15269 TCTTCCCGCCGTCCTCGAGTACCTCACAGCCGAGATCCTTGAGCTTGCTGGAAATGCCGC 15328 Query 68810 TCGTGACTCAAAGAAGG 68826 ||||||| ||||||| Sbjct 15329 TCGTGACAACAAGAAGG 15345 >seq833 Length=4630 Score = 86.0 bits (94), Expect = 2e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 68750 TCTTGCCGCTGCCATCGAGTACATCATCGCCGAGATCCTTGAGCTTGCCGGAAACGCCGC 68809 |||||| || | | | |||||| ||| |||||||||||||||||||||||||| ||||| Sbjct 2376 TCTTGCTGCCGTCCTTGAGTACCTCACAGCCGAGATCCTTGAGCTTGCCGGAAATGCCGC 2317 Query 68810 TCGTGACTCAAAGAAGG 68826 ||||||| ||||||| Sbjct 2316 TCGTGACAACAAGAAGG 2300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203675893817684