Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq35 107 4e-18 seq418 104 5e-17 >seq35 Length=115666 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||||| || ||| ||||||||||| || || |||||||| | Sbjct 64831 CTGATCGGCATGAACGCCCGGCTGATGACTCAGTACATCGAGTTTGTTGCCGACCGTCTA 64890 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||| | |||||| ||||||| ||||| | | ||||||||| | ||||||||| Sbjct 64891 CTGGTTTCGCTTGGTAACGAGAAGCACTACAATGCGACGAACCCCTTCGACTTTATGGAG 64950 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTT 230597 |||||| || ||||||||||| |||||||| Sbjct 64951 AACATTTCTCTGCAAGGGAAGACGAACTTCTT 64982 >seq418 Length=5304 Score = 104 bits (114), Expect = 5e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 319804 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAAC 319863 ||||| |||||||| ||||| || ||||| || | | || | ||||||||| Sbjct 2954 TCGGAACCGTCGAGGTCGTGCTCGACGTACCAGGTGCGGACCTCCTCGGGAGAGGGGAAG 3013 Query 319864 CCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGC 319923 || || | |||||||||| || |||||||| || || || || || | |||||| | Sbjct 3014 CCCTCGACCTGGCCGTTCTGGATGGCGCGCATGAGAGTAGACTTTCCGGAACCGTTTCGT 3073 Query 319924 CCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATT 319983 ||||| |||||||| |||| || || || ||| || | | |||| || ||||| Sbjct 3074 CCACAGAGACCGTAACGGTGACCACGCTTGAGGCGGAGAGTGGCGGTGTTGAGCAGAATC 3133 Query 319984 TTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || | || || || || || |||| ||| | || ||||||||||| Sbjct 3134 TTGGCGCCGTAGGCGAGGGAGAATTGACAGTTGCAGAGATCCTCACC 3180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057813604565210