Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq35 111 2e-19 >seq35 Length=115666 Score = 111 bits (122), Expect = 2e-19 Identities = 223/328 (68%), Gaps = 2/328 (1%) Strand=Plus/Minus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| ||| || || || ||| || | || ||||||| ||| || || || || || Sbjct 64727 AACAGCAGGCAGGCAAAGTCGGTGTGCAGGCCTTCGTCTCGGCTAATCAGCTCATTCGAG 64668 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || |||| ||||||||| || || ||||| | |||||| || | || ||||| ||| Sbjct 64667 AAGGTCAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAAAAGATGGACGCAAACGAGCCA 64608 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || ||||| || |||||||||| ||||| || || | || || || | |||| | Sbjct 64607 GAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAATCAGGCGCTCAGCAAATGTCGACTGG 64548 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194 ||| | |||||| ||||||||||||||||||| | | || || || Sbjct 64547 GTGTCGCTGATCCATCGGATAGCCCACTCGGCTTTTTGCTTGACGACGGGAATGGTCTCG 64488 Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAG 17253 ||||| | || | | ||| || | | || |||| ||||| || |||||||| || Sbjct 64487 ATGGCGTCGAACAGGTACTCGCGTTGC-GCAGAGTCGCGAATATATGTGTCGATGAGGAG 64429 Query 17254 GCTGTACATTTCGGAGTGTATGTTCTCC 17281 ||| | || ||||| ||||||||| Sbjct 64428 AGAGTATGTCTCAGAGTGGATGTTCTCC 64401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517540638031560