Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq245 98.7 2e-15 seq23 96.9 7e-15 >seq245 Length=21128 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || |||||||| |||||||| || || ||||| ||||| || Sbjct 11198 TGCTCTTCTACGGCGGACCAGGAACAGGGAAGACGTCGACGATTCTGGCTCTGGCGCGGC 11257 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 || || ||| || | | | | ||| ||||||||||||||||| |||||||| | Sbjct 11258 AACTCTTTGGCCCGGAGCTCTTTCGCTCGCGTGTGCTCGAGCTGAACGCCTCTGACGAGC 11317 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAG 254174 |||| | |||||| ||||| |||||||||| || ||||| Sbjct 11318 GCGGCATCTCCGTCGTGCGCGAGAAGATCAAGAACTTTGCCAAG 11361 >seq23 Length=147171 Score = 96.9 bits (106), Expect = 7e-15 Identities = 377/586 (64%), Gaps = 9/586 (2%) Strand=Plus/Plus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||||| ||||| || || || | ||| || || || || |||||||| | | || Sbjct 138961 CTTTGGCTTCAAGACTCTCGAAAGATCATACCTGCTGCGCATCAATGGCAAGGTTGCTGA 139020 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945 || || |||||| ||||||| || || ||||| || ||| ||||| || | Sbjct 139021 GCGGCCGCAACACATGCTGATGCGTGTCGCCGTCGGTATCCACGGCCGAGACATCGAC-G 139079 Query 248946 CGTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACG 249003 | ||| ||||||| |||| | ||| || | | ||||||||| | || || Sbjct 139080 C-TGCCATCGAGACATACAACCTGATGTCGGAGAAGTACTTCACACATGCCTCGCCCACT 139138 Query 249004 CTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAA 249063 |||||||||||||| || |||| ||||||| |||||||| || | ||||| | Sbjct 139139 CTCTTCAACGCCGGCACACCCAACCCTCAGCTGTCTTCGTGCTTCCTGGTCACCATGAAG 139198 Query 249064 GACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAATT 249122 |||||||| |||| || || || ||||| || || || | || | ||| || Sbjct 139199 GACGACTCCATCGAAGGTATCTACGACACCCTCAAGACCTGC-GCCATGATAAGCAAGAC 139257 Query 249123 CGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGG 249182 || || || || |||||| | | | |||||| | | || || |||||| || Sbjct 139258 TGCCGGTGGTATTGGTCTCAACATTCACTGCATCCGTGGCACTGGCTCCTACATCGCGGG 139317 Query 249183 TACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAG 249242 || || || || | || || || ||| | || ||| || | |||||| | Sbjct 139318 CACCAACGGCTTCTCCAACGGGATTGTGCCCATGCTGCGAGTCTACAACAACACCGCTCG 139377 Query 249243 GTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTG 249299 | | || |||| | || | || || | || ||||| || | || || Sbjct 139378 ATACGTCGACCAAGGTGGCAACAAGCGTCCCGGCGCCTTTGCCATCTACGTTGAGCCCTG 139437 Query 249300 GCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAG 249359 |||| | || | || |||||||| ||| | |||||| ||||||| ||| | | Sbjct 139438 GCACTCTGACGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTCCG 139497 Query 249360 AGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 ||| || || |||||||||| || ||| | |||||||||||||| Sbjct 139498 AGCTCGAGAGCTCTTCTACGCTCTCTGGATTCCCGACTTGTTCATG 139543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073755847896256