Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq32 89.7 5e-13 seq35 87.8 2e-12 seq25 87.8 2e-12 >seq32 Length=118755 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||||||| |||| ||| |||||||| || || Sbjct 111276 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGCTGCTTGCCG 111335 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || ||||||| || || || || || || || || || ||||| ||| || || Sbjct 111336 GCGAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTG 111395 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| | || ||||| | ||| | ||||||||||| | || Sbjct 111396 ACATTGTCGATGGTGTCGGAAGATTCGACCTCGAGGGTAATAGTCTTGCCGGTGAGAGTC 111455 Query 139748 TTTACGAATATTTGCAT 139764 |||||||| |||||||| Sbjct 111456 TTTACGAAGATTTGCAT 111472 >seq35 Length=115666 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| || ||||||| ||| || | || || ||| | || |||||| || | ||| Sbjct 64780 GAGGCGGTGACCATTGAACAAGCTTTCCTGACCGATGCTCTGCCAGTATCACTGATCGGC 64839 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||||| ||||| ||||||||||||||||||| ||| | || || | | Sbjct 64840 ATGAACGCCCGGCTGATGACTCAGTACATCGAGTTTGTTGCCGACCGTCTACTGGTTTCG 64899 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 || ||| | ||| |||| |||||| |||||||| |||||| | ||||| || Sbjct 64900 CTTGGTAACGAGAAGCACTACAATGCGACGAACCCCTTCGACTTTATGGAGAACATTTCT 64959 Query 53017 CTCGAGGGCAAAACAAACTTTTT 53039 || | || || || ||||| || Sbjct 64960 CTGCAAGGGAAGACGAACTTCTT 64982 >seq25 Length=137175 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| |||||| | || | ||| |||||||| || || Sbjct 84054 GTGGACTCCTTCTGGATGTTGTAATCGGAGAGCGTTCGGCCGTCCTCGAGCTGCTTGCCG 84113 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || ||||||||||||| || || ||||| ||||| || ||||| ||| || || Sbjct 84114 GCGAAGATCAGACGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTG 84173 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| || ||||||||| | ||| | |||||| ||||| | || Sbjct 84174 ACGTTGTCAATGGTGTCGGAGGACTCCACCTCGAGGGTGATCGTCTTCCCGGTGAGGGTC 84233 Query 139748 TTTACG 139753 || ||| Sbjct 84234 TTGACG 84239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496059243986400