Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq35 125 1e-23 >seq35 Length=115666 Score = 125 bits (138), Expect = 1e-23 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || || ||| |||||| || ||||||| ||||| || || || || Sbjct 64727 AACAGCAGGCAGGCAAAGTCGGTGTGCAGGCCTTCGTCTCGGCTAATCAGCTCATTCGAG 64668 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || |||||||| || || ||||| || |||||||| ||||||||||| || ||| Sbjct 64667 AAGGTCAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAAAAGATGGACGCAAACGAGCCA 64608 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAA 50104 || |||||||| || || || || |||||||||| Sbjct 64607 GAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAA 64574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718261913597880