Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq35 116 5e-21 >seq35 Length=115666 Score = 116 bits (128), Expect = 5e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || || || || ||| |||||| || || |||| ||||| | || || || Sbjct 64727 AACAGCAGGCAGGCAAAGTCGGTGTGCAGGCCTTCGTCTCGGCTAATCAGCTCATTCGAG 64668 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || |||||||| || || ||||| || |||||||| || |||||||| || ||| Sbjct 64667 AAGGTCAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAAAAGATGGACGCAAACGAGCCA 64608 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 42219 || |||||||| || || || || ||||||||||| || | ||| Sbjct 64607 GAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAATCAGGCGCTC 64564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671132765452920