Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq142 93.3 4e-14 >seq142 Length=44629 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| |||| ||| || ||||| || | || || ||| | |||| | || || | Sbjct 44289 CAAGATGCAGAGTCGACTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGGCCGTCTTCAA 44348 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| |||||| | ||||| | | || || || |||||||| || || ||||| | | Sbjct 44349 GCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGA 44408 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || | ||||||| | ||| |||||| | | ||||| || | |||||||| || | Sbjct 44409 TCTTGGTCTTGACGTTGTCGATAGTGTCCGAGGACTCGACTTCGAGGGTGATGGTCTTGC 44468 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || || ||||||||||| Sbjct 44469 CGGTCAGGGTCTTGACGAAGATCTGCAT 44496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448286902008120