Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq22 192 9e-45 >seq22 Length=148632 Score = 192 bits (212), Expect = 9e-45 Identities = 180/228 (79%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 |||||| ||||| || ||||||||||| || |||||||| |||||||| ||||| ||||| Sbjct 39793 CAGATC-CTTCGTGACAACATCCAAGGTATTACCAAGCCCGCTATCCGCCGTCTCGCTCG 39851 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||||||||| ||||||||| |||| || || |||| || |||| ||| | ||| | || Sbjct 39852 TCGTGGTGGTGTCAAGCGTATCTCCGGTCTGATCTACGACGAGACTCGCGGTGTCCTCAA 39911 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || |||| |||| ||| | || || ||||||||||| || || || Sbjct 39912 GCTCTTCCTCGAGTCCGTCATCCGTGACTCCGTCACATACACCGAGCACGCCAAGCGCAA 39971 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||||||||||||| | || ||||||| || | || || |||||||| Sbjct 39972 GACTGTCACCTCCCTCGACGTCGTCTACGCTCTCAAGCGCCAAGGCCG 40019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074498726531