Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq23 156 5e-33 seq35 125 9e-24 >seq23 Length=147171 Score = 156 bits (172), Expect = 5e-33 Identities = 590/916 (64%), Gaps = 10/916 (1%) Strand=Plus/Minus Query 62901 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 62960 |||| || || || || ||||||| || | | |||| || ||||||||||| | Sbjct 139866 GCCAAGTTGCAGACAGCGACCTCATCAGGAGCACTGTATTCGATGATCTCAGTGCACAAG 139807 Query 62961 TTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 63020 || |||||||| || || | || | || || ||| ||| || ||||| Sbjct 139806 TTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGGACTTGCGGTTGGCAGCGTCCTTG 139747 Query 63021 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 63080 || || ||||| ||| | ||||| || |||| | || | || || | ||||| | Sbjct 139746 TAGAGCATGAAGGGATTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCTTT 139687 Query 63081 CGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTA--TAGTGTATACAATCGT 63137 ||||||| || | || | | |||| || | ||||| | ||| | | Sbjct 139686 TGAGCCTTGATGGTGCGACGGGCCTTGCCTTCCT-TCTCGTACTTCTCGTAGAGGGCC-- 139630 Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 |||||||| || || | || | | | | || || || || | || ||||||| ||| Sbjct 139629 TCGAACTCCTCGCCGTACACGTCGGCGAGACCGGGGCACTCGTTGGGGCACATCAGAGAC 139570 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 ||||| |||| | | |||| ||||| || | || |||||||| ||||| || Sbjct 139569 CACTCGCCGTTCTGTTCGACTCTCTTCATGAACAAGTCGGGAATCCAGAGAGCGTAGAAG 139510 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 || |||| | || ||||| || || ||||| || ||||||||| | | Sbjct 139509 AGCTCTCGAGCTCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAG 139450 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||||| ||||| || || | ||| ||||| | | || || || ||||| || || Sbjct 139449 ACGTCAGAGTGCCAGGGCTCAACGTAGATGGCAAAGGCGCCGGGACGCTTGTTGCCACCT 139390 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||||| ||||||||| || || |||| || ||| || | ||| ||||| || Sbjct 139389 TGGTCGACGTATCGAGCGGTGTTGTTGTAGACTCGCAGCATGGGCACAATCCCGTTGGAG 139330 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 63496 | || ||||| || | ||| ||| ||| || |||| || | | | || | ||||| Sbjct 139329 AAGCCGTTGGTGCCCGCGATGTAGGAGCCAGTGCCACGGATGC-AGTGAATGTTGAGACC 139271 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || || || | || || | ||||| || | ||||| |||||||| || Sbjct 139270 AATACCACCGGCAGTCTTGCTTATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCTTC 139211 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAGTTC 63615 ||| || || ||||| | | || || || ||||| || | | | | || | Sbjct 139210 GATGGAGTCGTCCTTCATGGTGACCAGGAAGCACGAAGACAGCTGAGGGTTGGGT-GTGC 139152 Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63675 | || || || | || || || || || || || | || || || | || ||||| | Sbjct 139151 CGGCGTTGAAGAGAGTGGGCGAGGCATGTGTGAAGTACTTCTCCGACATCAGGTTGTATG 139092 Query 63676 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63735 |||| || || | ||| || || | || || || || ||||||||||| | ||||| Sbjct 139091 TCTCGATGGCAGCGTCGATGTCTCGGCCGTGGATACCGACGGCGACACGCATCAGCATGT 139032 Query 63736 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63795 | || || | ||| | | |||| || || || || ||| ||| |||| | ||| | Sbjct 139031 GTTGCGGCCGCTCAGCAACCTTGCCATTGATGCGCAGCAGGTATGATCTTTCGAGAGTCT 138972 Query 63796 TAAAACCAAAATAGTT 63811 | || ||||| ||||| Sbjct 138971 TGAAGCCAAAGTAGTT 138956 >seq35 Length=115666 Score = 125 bits (138), Expect = 9e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || || || ||| |||||| || ||||||| ||||| || || || || Sbjct 64727 AACAGCAGGCAGGCAAAGTCGGTGTGCAGGCCTTCGTCTCGGCTAATCAGCTCATTCGAG 64668 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || || |||||||| || || ||||| || |||||||| ||||| || || || ||| Sbjct 64667 AAGGTCAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAAAAGATGGACGCAAACGAGCCA 64608 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTC 33458 || |||||||| || || || |||||||||||||| || | ||| Sbjct 64607 GAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAATCAGGCGCTC 64564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622941227493720