Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq142 122 8e-23 seq32 113 4e-20 seq4 96.9 3e-15 >seq142 Length=44629 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||| || ||||||| ||||||| ||||| || Sbjct 44496 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCG 44437 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||| || || ||||| || |||||| Sbjct 44436 GACACTATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 44377 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || || | ||||| | |||||| | ||| |||||| Sbjct 44376 CAGCGCCTCATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGCACTCTCTCCGACTACAAT 44317 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || || || || ||| | || || || || | ||||| Sbjct 44316 ATTCAGAAGGAGTCGACTCTGCATCTTGTTCTCAGACTTCGTGGAGG 44270 >seq32 Length=118755 Score = 113 bits (124), Expect = 4e-20 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||||| || ||||||||| | ||||| || | || || |||| || || || Sbjct 111475 ACCATGCAAATCTTCGTAAAGACTCTCACCGGCAAGACTATTACCCTCGAGGTCGAATCT 111416 Query 25056 TCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 || ||||| ||||| || || ||| || ||| ||||| || || ||||| || | Sbjct 111415 TCCGACACCATCGA--CAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCGG 111358 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||||||||| | || || |||||||| || | || || | ||||||| || |||| | Sbjct 111357 ACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTGAGCGACT 111298 Query 25174 ACAATATTCAAAAAGAATCCACGCTACA 25201 |||| || || || || ||||| || || Sbjct 111297 ACAACATCCAGAAGGAGTCCACTCTCCA 111270 >seq4 Length=308026 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || ||||| | ||||| |||| |||||||| || Sbjct 60335 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCCTCC 60394 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || ||||| || |||| Sbjct 60395 GACACCATCGA--CAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 60452 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || |||||||| || | || |||| || ||| | || |||| Sbjct 60453 AACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTTTCGGACTACA 60512 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || || || || ||||| || || | ||||| Sbjct 60513 ACATCCAGAAGGAGTCCACCCTCCACCTCGTGCT 60546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433323949331105