Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14]
767 sequences; 20,105,270 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq418 107 4e-18
seq35 95.1 3e-14
>seq418
Length=5304
Score = 107 bits (118), Expect = 4e-18
Identities = 176/254 (69%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 334101 ATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCA 334160
|| ||||| ||||| | || | | ||||| |||||||| ||||| || |||||
Sbjct 2927 ATAAAGTCGATGATGGAAATCTCACCCTCGGAACCGTCGAGGTCGTGCTCGACGTACCAG 2986
Query 334161 GTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATC 334220
|| | | || | ||||||||| || || | ||| |||||| || ||||||||
Sbjct 2987 GTGCGGACCTCCTCGGGAGAGGGGAAGCCCTCGACCTGGCCGTTCTGGATGGCGCGCATG 3046
Query 334221 AGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGA 334280
||||| || || || | |||||| | ||||| |||||||| |||| |||||||| ||
Sbjct 3047 AGAGTAGACTTTCCGGAACCGTTTCGTCCACAGAGACCGTAACGGTGACCACGCTTGAGG 3106
Query 334281 TTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCA 334340
|| | |||| || ||||| || | || || || || || |||| ||| |
Sbjct 3107 CGGAGAGTGGCGGTGTTGAGCAGAATCTTGGCGCCGTAGGCGAGGGAGAATTGACAGTTG 3166
Query 334341 CACAGATCCTCACC 334354
|| |||||||||||
Sbjct 3167 CAGAGATCCTCACC 3180
>seq35
Length=115666
Score = 95.1 bits (104), Expect = 3e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| || ||||||||| | || ||| ||||||||||| || || |||||||| |
Sbjct 64831 CTGATCGGCATGAACGCCCGGCTGATGACTCAGTACATCGAGTTTGTTGCCGACCGTCTA 64890
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| | |||||||| | ||||| ||||| | | ||||||||| | ||||||||||
Sbjct 64891 CTGGTTTCGCTTGGTAACGAGAAGCACTACAATGCGACGAACCCCTTCGACTTTATGGAG 64950
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTT 243713
|||||| || |||||||| || ||||||||
Sbjct 64951 AACATTTCTCTGCAAGGGAAGACGAACTTCTT 64982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102869161791450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |