Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq418 107 4e-18 seq35 95.1 3e-14 >seq418 Length=5304 Score = 107 bits (118), Expect = 4e-18 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 334101 ATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCA 334160 || ||||| ||||| | || | | ||||| |||||||| ||||| || ||||| Sbjct 2927 ATAAAGTCGATGATGGAAATCTCACCCTCGGAACCGTCGAGGTCGTGCTCGACGTACCAG 2986 Query 334161 GTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATC 334220 || | | || | ||||||||| || || | ||| |||||| || |||||||| Sbjct 2987 GTGCGGACCTCCTCGGGAGAGGGGAAGCCCTCGACCTGGCCGTTCTGGATGGCGCGCATG 3046 Query 334221 AGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGA 334280 ||||| || || || | |||||| | ||||| |||||||| |||| |||||||| || Sbjct 3047 AGAGTAGACTTTCCGGAACCGTTTCGTCCACAGAGACCGTAACGGTGACCACGCTTGAGG 3106 Query 334281 TTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCA 334340 || | |||| || ||||| || | || || || || || |||| ||| | Sbjct 3107 CGGAGAGTGGCGGTGTTGAGCAGAATCTTGGCGCCGTAGGCGAGGGAGAATTGACAGTTG 3166 Query 334341 CACAGATCCTCACC 334354 || ||||||||||| Sbjct 3167 CAGAGATCCTCACC 3180 >seq35 Length=115666 Score = 95.1 bits (104), Expect = 3e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || ||||||||| | || ||| ||||||||||| || || |||||||| | Sbjct 64831 CTGATCGGCATGAACGCCCGGCTGATGACTCAGTACATCGAGTTTGTTGCCGACCGTCTA 64890 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | |||||||| | ||||| ||||| | | ||||||||| | |||||||||| Sbjct 64891 CTGGTTTCGCTTGGTAACGAGAAGCACTACAATGCGACGAACCCCTTCGACTTTATGGAG 64950 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTT 243713 |||||| || |||||||| || |||||||| Sbjct 64951 AACATTTCTCTGCAAGGGAAGACGAACTTCTT 64982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102869161791450