Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq23 167 3e-36 seq35 105 8e-18 >seq23 Length=147171 Score = 167 bits (184), Expect = 3e-36 Identities = 1114/1762 (63%), Gaps = 65/1762 (4%) Strand=Plus/Minus Query 113596 TCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGA 113655 |||||||||||| | |||||||| || |||| ||||||| | || | ||||| | Sbjct 140761 TCGGAGGTAGTATGTTCCCGTCTTCAGACCCTTCTTCCAGCCGTAGAAGTGCATGCTCGT 140702 Query 113656 CAACTTGGAGAGTGTTGGACTT-TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGA 113714 || ||| | | ||| | || | || ||||| |||||| ||||| ||||| Sbjct 140701 CAG-TTGACCAAAGCTGGGTGCCTGCAGGTGGATGTTCAGACTTTGCGATTGGCAGATGA 140643 Query 113715 AGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTC 113774 | ||| || || || ||||| || || | |||| | ||| ||||| || || Sbjct 140642 ACGCTCCTCGGTCGGCGGCCATGTCTATGATGACCTTTTGCGAGATCTCCCAGACCGTCT 140583 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATC---CACGATATTTTGGATGGAGCCACCCG 113831 ||||||| ||| || || || || | |||| ||||| || |||||||| Sbjct 140582 TGTAGAGAGCCTTGATGCGGTCAGGAATGCCGGGCACG---TTTTGAATCGAGCCACCG- 140527 Query 113832 CCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT 113888 | | | |||| | | |||||| | || ||| ||||| || ||| || Sbjct 140526 --TGGGCAATGATACGGTTCTTCATCTGCTCGTTCCACAGACCTTGCTCCACGAGCTCAC 140469 Query 113889 CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATAT 113948 || ||| ||||| || ||||| || || ||| || | || | | Sbjct 140468 GCAGGAGCCAAGGGTTGACGACTTGGAACTCGCCGGCCAGGACTCGGCGGGTGTAAAGGT 140409 Query 113949 TGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATT-TGGGCGGTGGAGGCTGTG 114007 || | ||||| ||||| |||||||| ||| | |||||| | || | ||| ||||| || Sbjct 140408 TGCTGGTGTAAGGCTCGAAGCACTCGTTGA-AGCCAAGAATCTGAGAGGTCGAGGCAGTC 140350 Query 114008 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGG 114067 ||||||||||| | ||| || ||| ||||| || | || | |||||| Sbjct 140349 GGCATGGGTGCGAGGAGGAGCGAGTTGCGGAGGCCGTGGGTGGCGATCTTCTGCTTGAGC 140290 Query 114068 GCGTCCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 114126 || ||||||| || | ||| || | | | ||| | || | ||||| || Sbjct 140289 TCGGCCCAGTCCCAGAGGCTGCTGGGTGTAACGCC-CCAAAAGTCGTATTGGAGCTCGCC 140231 Query 114127 TTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGC--CAAT-TC 114183 | | ||| || || | |||||||||| | |||| | ||| || |||| || Sbjct 140230 CTTGCTGGCAGGGCTGCCGGCGTATGTCTCGTAGGTGCCC---AGCTCAGCAGCAATCTC 140174 Query 114184 GGAGCTCGC-CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 114242 | | | || |||||| || ||||| || || |||||||| || || || | || Sbjct 140173 GCA-CGAGCGCTCGAGAGCGGCGTGGTAGATAGTCTCAAAGATTTGAATGTTAAGCTTCT 140115 Query 114243 TGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGA 114302 |||||||| | || || || || | || || |||| |||||||| | || Sbjct 140114 TGGCCTCGGGGCTGTCGAAAGCATATCCCATGATCATGAAGGCATCGGCGAGACCGTTGA 140055 Query 114303 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGAT 114359 |||||| ||||| || || || | | || ||||| ||| ||| ||||| | Sbjct 140054 CACCGATACCAATGGGACGGTGGCGGAAGTTGGACTTCTTAGC---CTCGGGAACGGGGT 139998 Query 114360 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 114419 | | || | ||||| | | | || | || | ||||||||| |||| ||||| | Sbjct 139997 AGTAGTTGATGTCGATGATCTTGTTCAAGTTGCCGCAGACAACCTTGGTGACCTCATGGA 139938 Query 114420 GCTTTTCGTAATCAAAACTGCGAGTCTC---TTCATTGACATACTT-----AGGA----A 114467 |||| | | | || | |||| || | || ||| | || || |||| | Sbjct 139937 GCTTCTTGAAGTCGTATGTGCGGGTGTTGGTTTGGTTGTCGTAGTTGATGTAGGAGGGGA 139878 Query 114468 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 114527 |||| || |||| || || |||| | |||||| | || |||| || || || | Sbjct 139877 GGGCCATGCTAGCCAAGTTGCAGACAGCGACCTCATCAGGAGCACTGTATTCGATGATCT 139818 Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 | || ||||| || || | ||| ||||| || | |||||| || || ||||| ||| Sbjct 139817 CAGTGCACAAGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGGACTTGCGGTTGG 139758 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647 || |||||||| |||||| | || | || ||||| || |||| || ||| || || | Sbjct 139757 CAGCGTCCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCGT 139698 Query 114648 TCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG--CTCGCCCCTCCTCCTCGTACTTTG 114704 ||||| | | | | || | | ||| || || || ||| |||| ||||||||| Sbjct 139697 ACCAGAGCTTTTGAGCCTTG-ATGGTG-CGACGGGCCTTGCCT-TCCTTCTCGTACTTCT 139641 Query 114705 TGTAGAGGGCTTCAAACTCTTCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 114761 ||||||||| || ||||| || || |||| || | ||| || || || | | Sbjct 139640 CGTAGAGGGCCTCGAACTCCTCGCCGTACACG---TCGGCGAGACCGGGGCACTCGTTGG 139584 Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821 |||| | |||||||| | || || || || | ||||||||| | ||| || |||| Sbjct 139583 GGCACATCAGAGACCACTCGCCGTTCTGTTCGACTCTCTTCATGAACAAGTCGGGAATCC 139524 Query 114822 AGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881 ||||||| ||||||| || ||| || | || || | || || || || | | Sbjct 139523 AGAGAGCGTAGAAGAGCTCTCGAGCTCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGT 139464 Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 114941 | | || || | || || | |||||| || || | ||| | || | | || || Sbjct 139463 CGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAACGTAGATGGCAAAGGCGCCGGGAC 139404 Query 114942 GACGA---CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAA 114998 | ||| | |||| || || | || ||| || | || || ||||| || | Sbjct 139403 GCTTGTTGCCACCTTGGTCGACGTATCGAGCGGTGTTGTTGTAGACTCGCAGCATGGGCA 139344 Query 114999 TGATACCATCAGATTGGCCATTTGTCCCC-CGAA-TACGAGACTTATTGGCTCTGACATC 115056 || || | || ||| || || ||| ||| || ||| | | || | | || Sbjct 139343 CAATCCCGTTGGAGAAGCCGTTGGTGCCCGCGATGTAGGAGCC--AGTGCCACGGATGCA 139286 Query 115057 ATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 115116 || |||| | ||||||||| || || ||| || ||||| | |||| | Sbjct 139285 GTGAATGTTGAGACCAATACCACCGGCAGTCTTGCTTATCATGGCGCAGGTCTTGAGGGT 139226 Query 115117 GCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG 115176 | ||||||| || ||||| ||||| |||| | | || |||||||| |||| || Sbjct 139225 GTCGTAGATACCTTCGATGGAGTCGTCCTTCATGGTGACCAGGAAGCACGAAGACAGCTG 139166 Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGG 115235 || | ||||| || ||||||||||| || || | || || |||| ||| | | | Sbjct 139165 AGGGTTGGGTGTGCCGGCGTTGAAGAGAGTGGGCGAGGCATGTGTGAA-GTACTTCTCCG 139107 Query 115236 ACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 115295 ||||| | ||| ||||| | | | ||| |||||| ||||| ||||||| | || Sbjct 139106 ACATCAGGTTGTATGTCTCGATGGCAGCGTCGATGTCTCGGCCGTGGATACCGACGGCGA 139047 Query 115296 CCCGCATAAACATGTATTGGGG 115317 | ||||| | ||||| ||| || Sbjct 139046 CACGCATCAGCATGTGTTGCGG 139025 >seq35 Length=115666 Score = 105 bits (116), Expect = 8e-18 Identities = 174/247 (70%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| || || ||||| ||| || || |||||||||||| ||| || Sbjct 64716 GGCAAAGTCGGTGTGCAGGCCTTCGTCTCGGCTAATCAGCTCATTCGAGAAGGTCAGGCC 64657 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| ||||| |||||||||| ||| || || | ||| || || ||||||||||| Sbjct 64656 GGGCATCAGACCGCGCTTCTTCAGCCAAAAGATGGACGCAAACGAGCCAGAGAAGAAGAT 64597 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || || || |||| || ||||||||||| | ||||| ||||| Sbjct 64596 GCCCTCGACGGCAGCAAAGGCAATCAGGCGCTCAGCAAATG---TCGACTGGGTGTCGCT 64540 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGG-ACGGTCTGGATCGCTT 126281 | ||| || ||||||| || |||| || || ||||| | ||||| ||| || | Sbjct 64539 GATCCATCGGATAGCCCACTCGGCTTTTTGCTTGA-CGACGGGAATGGTCTCGATGGCGT 64481 Query 126282 CAAAGAG 126288 | || || Sbjct 64480 CGAACAG 64474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597347872872360