Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq23 297 2e-75 >seq23 Length=147171 Score = 297 bits (328), Expect = 2e-75 Identities = 618/912 (68%), Gaps = 10/912 (1%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| |||||| ||||| || | || ||||| || || |||||| |||| | Sbjct 138959 TACTTTGGCTTCAAGACTCTCGAAAGATCATACCTGCTGCGCATCAATGGCAAGGTTGCT 139018 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACAT-GCC 93842 ||||| ||||| || |||||||||| |||||| |||| || ||||||| ||||| | | Sbjct 139019 GAGCGGCCGCAACACATGCTGATGCGTGTCGCCGTCGGTATCCACGGCCGAGACATCGAC 139078 Query 93843 GAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCACCCCGA 93901 | || | | | | || ||| ||| ||| | || |||| || | || | Sbjct 139079 GC-TGCCATCGAGACATACAACCTGATGTCGGAGAAGTACTTCACACATG-CCTCGCCCA 139136 Query 93902 CCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACA 93961 | || |||||||| || || || || ||| |||||||||| |||||| | || | | Sbjct 139137 CTCTCTTCAACGCCGGCACACCCAACCCTCAGCTGTCTTCGTGCTTCCTGGTCACCATGA 139196 Query 93962 AGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAA--A 94019 ||| |||||||||| || || | ||||| ||||||| ||| || | || || | Sbjct 139197 AGGACGACTCCATCGAAGGTATCTACGACACCCTCAAGACCTGCGCCATGAT---AAGCA 139253 Query 94020 ATAC-GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCC 94078 | || || || || || || ||| | ||| | | |||| || || ||||||||| Sbjct 139254 AGACTGCCGGTGGTATTGGTCTCAACATTCACTGCATCCGTGGCACTGGCTCCTACATCG 139313 Query 94079 GCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGG 94138 || ||||| ||| ||||||||| | || || ||||| || |||| ||||||| | | Sbjct 139314 CGGGCACCAACGGCTTCTCCAACGGGATTGTGCCCATGCTGCGAGTCTACAACAACACCG 139373 Query 94139 CGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGC 94198 | || ||||| ||||| ||||| | | | || | || || |||| | |||| Sbjct 139374 CTCGATACGTCGACCAAGGTGGCAACAAGCGTCCCGGCGCCTTTGCCATCTACGTTGAGC 139433 Query 94199 CCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGG 94258 |||||||| | ||||| | ||| ||||||| || |||||||||||||| || || Sbjct 139434 CCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGG 139493 Query 94259 AGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCG 94318 | || |||| |||||||||||||||||| | || ||| | || ||||| | |||| Sbjct 139494 TCCGAGCTCGAGAGCTCTTCTACGCTCTCTGGATTCCCGACTTGTTCATGAAGAGAGTCG 139553 Query 94319 AGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTT 94378 | | ||| || ||| ||| | || ||||| || || ||||| || ||||||| | Sbjct 139554 AACAGAACGGCGAGTGGTCTCTGATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACGTGT 139613 Query 94379 GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGG 94438 || | || || | | | || | ||||| | | ||||||||| | Sbjct 139614 ACGGCGAGGAGTTCGAGGCCCTCTACGAGAAGTACGAGAAGGAAGGCAAGGCCCGTCGCA 139673 Query 94439 TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGC 94498 || | ||| ||||| ||| | ||| | || | ||| ||||| || | | Sbjct 139674 CCATCAAGGCTCAAAAGCTCTGGTACGCCATCCTCGAGGCCCAGACCGAGACTGGCAATC 139733 Query 94499 CCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGA 94558 ||| ||| | | ||||||| ||| |||| ||||||||||||| || ||||||| | Sbjct 139734 CCTTCATGCTCTACAAGGACGCTGCCAACCGCAAGTCCAACCAGAAGAACCTCGGTACCA 139793 Query 94559 TCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTG 94618 ||||| |||| || ||||||| ||||| |||| || | | |||| || ||| | |||| Sbjct 139794 TCAAGTGCTCCAACTTGTGCACTGAGATCATCGAATACAGTGCTCCTGATGAGGTCGCTG 139853 Query 94619 TGTGTAACCTGG 94630 | || ||| ||| Sbjct 139854 TCTGCAACTTGG 139865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718456841320