Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq452 322 6e-83 seq3 197 2e-45 seq215 100 4e-16 seq76 100 4e-16 seq59 82.4 1e-10 >seq452 Length=4188 Score = 322 bits (356), Expect = 6e-83 Identities = 610/891 (68%), Gaps = 14/891 (2%) Strand=Plus/Minus Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300 || || ||||| ||||| || || || || || || ||||| || | || ||| | | | Sbjct 4029 CAGAGCTCCTCGAAACGGGCGCGCGTGATCGAGGTGTAGAAGTCGATACCCTCGAAGAGC 3970 Query 7301 GAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 || || ||||| ||||| || || || | ||||| | |||||||| |||||||| Sbjct 3969 GAGTCGATTTCGATGGTGGTCTGGGCGGCAGAAGACAGGGTTCGCTTCGCGCGCTCGGCA 3910 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || ||||| | ||| || | ||| || | | | || || || ||||| | || || Sbjct 3909 GCTGTTCGGAGACGTCGGACGGCGCGTGCGGAAGAGGTGATGTCCTTCTTGTTCTTGCGC 3850 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA--TCTTCACCACCCAAGT 7478 || | || | ||||| | ||| | || | | || || ||||||||||||| Sbjct 3849 TTGGATTCCTGGACAAAGTGGTTGACGAGGC--GATTGGCAAAGTCCTCACCACCCAAGT 3792 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | || || || ||||| || ||||| || ||||| || | || ||| | | | ||||| Sbjct 3791 GGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATGCCCTCCTCGATGGTGAGGAGCGAAA 3732 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCT 7598 |||| || || || || || || || || ||||| |||||| | ||| | || |||| Sbjct 3731 CATCGAAGGTGCCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCCTCGCCCTTCT 3672 Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTC 7657 | ||||||||||| ||||| || || || || | || || || || || | |||| || Sbjct 3671 TGTCGAGACCGTAGGCGATGGCGGCAGCGGTGGACTCGTTGATGATGCGCATGACA-TTA 3613 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 || || ||||| || | || || | || || ||||| ||||| ||||| |||||||| Sbjct 3612 AGACCGGCAATGGTGCCTGCGTCCTAGGTGGCCTGTCGCTGCGAGTCGTTGAAGTAGGCG 3553 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 ||||| ||||| || |||||| |||| | |||||| || | || ||| | || | Sbjct 3552 GGGACTGTTACCACGGCGTCCTTGACGGTGCCACCGAGCTAGGCCTCTGCGGTCTCGCGC 3493 Query 7778 ATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTA 7837 || ||||| || ||||| | || ||||| || | | || || || | || || Sbjct 3492 ATCTTGGTGAGGACCATGGCGGAGATCTCCTCCGGTGTGAAGGTCTTGGTCTTGCCCTTG 3433 Query 7838 AAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG-GGATAACCTTATACGACCAATC 7896 | || || | || ||||| || || || || ||| ||||| | | ||| | Sbjct 3432 GACTCGACCTGGATTATGGGCTT----GCTGCCTTGGTCGATGACCTTGAAGGGCCAGTG 3377 Query 7897 TTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATC 7956 ||||| ||| ||||| | | ||| | |||||| | ||||| |||||||| || || Sbjct 3376 CTTCATGTCGGACTGGACTTCGTTGTCTGTAAACTTGCGGCCGATGAGACGCTTGGCGTC 3317 Query 7957 AAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACG 8016 || || ||||| | | ||||||| || || ||||||| || |||| ||||| ||||| Sbjct 3316 GAAGACGGTGTTGTGGAGGTTCATCGCGGTCTGGTTCTGGGCGGCGTGACCGATCAGACG 3257 Query 8017 TTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGC 8076 || | || || || |||||||| || || || ||||| || || ||| |||| || Sbjct 3256 CTC---GGTGTCGGTGAAGGCGACGTATGAGGGAGTGGTTCGGTTACCCTGGGCGTTGGC 3200 Query 8077 AATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGT 8127 || | || || |||| |||||||||||| | || ||||| || | ||| Sbjct 3199 GATGACCTCGACATGGTCATTTTGCCAGACGGCAACACACGAGTATGCTGT 3149 >seq3 Length=326586 Score = 197 bits (218), Expect = 2e-45 Identities = 330/475 (69%), Gaps = 8/475 (2%) Strand=Plus/Plus Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||| || || ||||| || | || || || || || ||||| ||||| ||||| ||||| Sbjct 553 GTTAAGACCGGCAATGGTGCCTGCGTCCTTGGTGGCCTGTCGCTGCGAGTCGTTGAAGTA 612 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 ||| || || ||||| || |||||| |||| | |||||| || | || ||| | || Sbjct 613 GGCGGGAACTGTTACTACGGCGTCCTTGACAGTGCCACCGAGGTAAGCCTCTGCGGTCTC 672 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 ||| || || || ||||| | || ||||| || | | || || || || || Sbjct 673 GCGCATCTTCGTGAGTACCATGGCGGAGATCTCCTCCGGTGTGAAGGTCTTGGTCTCGCC 732 Query 7834 GTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG-GATAACCTTATACGACC 7892 || | || || | || ||||| || || || || ||| ||||| | | || Sbjct 733 CTTGGATTCGACCTGGATTATGGGCTT----GCTGCCTTGGTCGATGACCTTGAAGGGCC 788 Query 7893 AATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTG 7952 | | ||||| ||| || || | | ||| | |||||| | ||||| |||||||| | Sbjct 789 AGTGCTTCATGTCGGACTGCACTTCGTTGTCTGCAAACTTGCGGCCGATGAGACGCTTGG 848 Query 7953 CATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAA 8012 | || ||||| ||||| | ||||||||| || || |||||||| || ||||| ||||| | Sbjct 849 CGTCGAAAACGGTGTTGTGGGGGTTCATCGCGGTCTGGTTCTTGGCGGCGTCACCGATCA 908 Query 8013 GACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGT 8072 |||| || | | | || || |||||||| || || || ||||| || || ||||||| Sbjct 909 GACGCTCGGTGT---CGGTGAAGGCGACGTATGAGGGAGTAGTTCGGTTACCCTGGTCGT 965 Query 8073 TCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGT 8127 | || || | || || ||||| |||||||||||| | || || || || | ||| Sbjct 966 TGGCGATGACCTCGACACGGTCATTTTGCCAGACGGCAACACATGAGTATGCTGT 1020 Score = 107 bits (118), Expect = 2e-18 Identities = 261/394 (66%), Gaps = 1/394 (0%) Strand=Plus/Plus Query 7127 GGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTT 7186 ||||| || ||||| |||||||| | || || || | || | || || ||||| Sbjct 46 GGGATACGGGTCGAACCACCGACGAGCACAATCTCGTGGACGGAGGCCTTGTCTATCTTG 105 Query 7187 GAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGT 7246 ||||| || || || ||||| || || || | ||| | || || || Sbjct 106 GAGTCGCGGAGAACCTTCTCGACGGGGTCGATGGTGTGGGAGAAGAGATCACCGCAGAGC 165 Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| || || || || || || ||||| || | || ||| | | ||| || Sbjct 166 TCCTCGAAACGGGCGCGCGTGATCGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCG 225 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 ||||| ||||| || || || | ||||| | |||||||| |||||||| || ||| Sbjct 226 ATTTCGATGGTGGTCTGGGCGGCAGAAGACAGGGTTCGCTTCGCGCGCTCGGCAGCAGTT 285 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | ||| || | ||| || | | | || ||| || ||||| | || || || || Sbjct 286 CGGAGACGTCGGACGGCGCGTGCGGAAGAGGTAATGTCCTTCTTGTTCTTGCGCTTGAAT 345 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || | ||||| || ||| | || || || ||||||||||| || || || Sbjct 346 TCCTGGACAAAGTGGTTAACGAGGCGGTTGTCAAAGTCCTCACCACCCAAATGGGTGTCA 405 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGAT-ACCTCCT 7519 || ||||| || ||||| || ||||| |||||| Sbjct 406 CCGGCGGTGGCCTTGACCTCGAAGATGCCCTCCT 439 >seq215 Length=25559 Score = 100 bits (110), Expect = 4e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||||| ||||||||||| || || || || || || || || || | |||||| ||| | Sbjct 7530 TTCTTGTCGAGACCGTAGGCAATGGCGGCAGCGGTGGGCTCGTTGACAATACGGAGAACG 7589 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 | || ||||| || || | || || || || || || ||||| | ||||| |||||| Sbjct 7590 GTGAGACCAGCGATGGTGCCGGCGTCCTTGGTGGCCTGACGTTGGGCGTCGTTGAAGTAG 7649 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || ||||| || ||||| |||| ||||| | ||||| || | || ||| | || Sbjct 7650 GCGGGGACAGTGACGACAGCGTGGGTGACGGGGTGGCCGAGGTAAGCCTCAGCGGTTTCC 7709 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 ||||| || || ||||| | || ||||| || Sbjct 7710 TTCATCTTCTGGAGGACCATGGCGGAGATCTCCTC 7744 Score = 86.0 bits (94), Expect = 8e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 7961 ACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCA 8020 |||||||| | ||||| | || | |||||||| || ||||| |||| || | ||| Sbjct 7967 ACTGTGTTCTCTGGGTTGTTAGCGGCCTGGTTCTTGGCGGCGTCACCGACTAGTCTCTCA 8026 Query 8021 TTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATA 8080 | | || || || ||||||||||| || || | || || || |||||||| | || Sbjct 8027 TCTTCCTCGGTGAAGGCGACGTACGAAGGAGTGATACGGTTACCCTGGTCGTTGGTGATG 8086 Query 8081 ATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATA 8140 || || || ||| | | | | ||| ||||| || || || || ||||| | ||| ||| Sbjct 8087 ATCTCGACACGGCCCTCTCGTTGGACACCGACACAGGAGTAGGTGGTTCCCAGATCGATA 8146 Query 8141 CCGAT 8145 ||||| Sbjct 8147 CCGAT 8151 >seq76 Length=74510 Score = 100 bits (110), Expect = 4e-16 Identities = 152/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || || ||||| | |||| ||| Sbjct 19290 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCAGCAGTGGCCTTGACGGCGAAGACACCA 19231 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | | || ||||| ||||| || || ||||| || |||||||| ||| Sbjct 19230 CCAGTGATGTTGAGGAGAGAGACATCGAACGTGCCTCCTCCCAGATCGAAAATGAGAACG 19171 Query 7577 TTCGTATC----GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 ||| | || | || ||| | ||||||||||| || || || || || || || Sbjct 19170 TTCTTCTCTGTTGACGACTTGG----AGTCGAGACCGTAGGCAATGGCGGCAGCGGTAGG 19115 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 || || || ||||| ||| || || ||||| || Sbjct 19114 CTCGTTGATGATACGGAGAACGTCGAGACCAGCGAT 19079 >seq59 Length=86606 Score = 82.4 bits (90), Expect = 1e-10 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| ||||||||||| || | ||| || || || || || || || | ||| || || Sbjct 40222 CTTGTCGAGACCGTAGGCAAGAGCAGCAGCGGTGGGCTCGTTGATGACACGGAGGACGTC 40163 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || || ||||| || | || || || || || ||||||||||| ||||| |||||||| Sbjct 40162 AAGACCGGCAATGGTACCAGCGTCCTTGGTGGCCTGTCGTTGCGAGTCGTTGAAGTAGGC 40103 Query 7717 CGGGACCGTTACGAC 7731 ||||| || | ||| Sbjct 40102 GGGGACAGTGATGAC 40088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635126710664280