Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq23 183 4e-41 seq35 87.8 2e-12 >seq23 Length=147171 Score = 183 bits (202), Expect = 4e-41 Identities = 574/878 (65%), Gaps = 11/878 (1%) Strand=Plus/Minus Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389 ||||||| | || || || ||||||||||| | ||| ||| ||| | ||||||||| | Sbjct 139832 TGTATTCGATGATCTCAGTGCACAAGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGT 139773 Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449 | || ||| |||| || ||||| ||||||||| | || | ||||| || ||||| | Sbjct 139772 TGGACTTGCGGTTGGCAGCGTCCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGGG 139713 Query 110450 ACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAG-CGAGACCTTCC 110508 || ||| ||||| | ||| | | || || || ||| | | |||||| Sbjct 139712 CCTCGAGGATGGCGTACCAGAGCTTTTGAGCCTTGATGGT-GCGACGGGCCTTGCCTTCC 139654 Query 110509 TCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTC 110568 | ||||||||| ||| | | |||| || |||| |||||||| || | ||||| Sbjct 139653 TTCTCGTACTTCTCGTAGAGGGCCTCGAACTCCTCGCCGTACACGTCGGCGAGACCGGGG 139594 Query 110569 GCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628 || || ||| || | || ||||| | || || || || ||||||||||||| | Sbjct 139593 CACTCGTTGGGGCACATCAGAGACCACTCGCCGTTCTGTTCGACTCTCTTCATGAACAAG 139534 Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTG 110688 || |||||||| | || |||| || || || || |||| || | || ||||| Sbjct 139533 TCGGGAATCCAGAGAGCGTAGAAGAGCTCTCGAGCTCGGACCTCCTCCTTGCCGTGGTTC 139474 Query 110689 AGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATG 110748 ||| || || | || || | || || |||||||| || || | |||| || | | Sbjct 139473 TTGCGGAGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAACGTAGATGGCAAAG 139414 Query 110749 GATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 | || ||| || | |||| || || || || ||| ||| |||| | Sbjct 139413 GCGCCGGGACGCTTGTTGCCACCTTGGTCGACGTATCGAGCGGTGTTGTTGTAGACTCGC 139354 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 ||||| || | ||| || | ||| || || || ||| || ||| | || || Sbjct 139353 AGCATGGGCACAATCCCGTTGGAGAAGCCGTTGGTGCCCGCGATGTAGGAGCCAGTGCCA 139294 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924 || ||| ||| || | | |||||||||||| || ||| || || || || || Sbjct 139293 CGGATGCAGTGAATGTTGAGACCAATACCACCGGCAGTCTTGCTTATCATGGCGCAGGTC 139234 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | |||| || | || ||||| || || || || |||| ||| | || ||||| || Sbjct 139233 T-TGAGGGTGTCGTAGATACCTTCGATGGAGTCGTCCTTCATGGTGACCAGGAAGCACGA 139175 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 ||||| |||||| || || || || |||||||| || || | ||||| |||| Sbjct 139174 AGACAGCTGAGGGTTGGGTGTGCCGGCGTTGAAGAGAGTGGGCGAGGCATGTGTGAA-GT 139116 Query 111045 ACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATAC 111103 || | | |||||| ||||||||| |||| || | | | ||| ||||| |||| Sbjct 139115 ACTTCTCCGACATCAGGTTGTATGTCTCGATGGCAGCGTCGATGTCTCGGCCGTGGATAC 139056 Query 111104 CAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCT 111163 | | ||| || ||||| | ||| | ||| ||| || | ||| |||| | ||| Sbjct 139055 CGACGGCGACACGCATCAGCATGTGTTGCGGCCGCTCAGCAACCTTGCCATTGATGCGCA 138996 Query 111164 GAAGGTA-ACTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200 | ||||| |||| || || ||||||| |||||||| Sbjct 138995 GCAGGTATGATCTT-TCGAGAGTCTTGAAGCCAAAGTA 138959 >seq35 Length=115666 Score = 87.8 bits (96), Expect = 2e-12 Identities = 206/305 (68%), Gaps = 11/305 (4%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || ||||| || || || |||||||| |||| || || Sbjct 64716 GGCAAAGTCGGTGTGCAGGCCTTCGTCTCGGCTAATCAGCTCATTCGAGAAGGTCAGGCC 64657 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTT-CCAGAAAAGAAGA 119613 ||||| || || | ||||| ||||||||||||| || |||| ||||| ||||||| Sbjct 64656 GGGCATCAGACCGCGCTTCTTCAGCCAAAAGATGG-ACGCAAACGAGCCAGAGAAGAAGA 64598 Query 119614 TGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACT---TGTC-- 119668 ||||||| || || || || | || |||||||| ||| ||| |||| |||| Sbjct 64597 TGCCCTCGACGGCAGCAAAGGCAATCAGGCGCTCAGC-AAATGTC--GACTGGGTGTCGC 64541 Query 119669 -GAACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTT 119727 || ||| || |||||| | ||| || ||| | | ||| | || | |||||| | Sbjct 64540 TGATCCATCGGATAGCCCACTCGGCTTTTTGCTTGACGACGGGAATGGTCTCGATGGCGT 64481 Query 119728 CGAAAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGG 119787 |||| || | || || ||| || ||||||| | || ||||| |||||| | Sbjct 64480 CGAACAGGTACTCGCGTTGCGCAGAGTCGCGAATATATGTGTCGATGAGGAGAGAGTATG 64421 Query 119788 TCTCA 119792 ||||| Sbjct 64420 TCTCA 64416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970353192600