Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq23 201 1e-46 seq35 105 8e-18 >seq23 Length=147171 Score = 201 bits (222), Expect = 1e-46 Identities = 562/852 (66%), Gaps = 23/852 (3%) Strand=Plus/Minus Query 106472 GCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAG 106531 ||||| ||||| ||||| |||||| | | |||| || | || || || |||||| Sbjct 139866 GCCAAGTTGCAGACAGCGACCTCATCAGGAGCACTGTATTCGATGATCTCAGTGCACAAG 139807 Query 106532 TTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTG 106591 ||||| | ||| || || || | ||||| ||||| ||| |||| || |||||| Sbjct 139806 TTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGGACTTGCGGTTGGCAGCGTCCTTG 139747 Query 106592 TAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATC 106650 ||||||||| |||| | || ||||| ||||| | || ||| || || | ||| | | | Sbjct 139746 TAGAGCATGAAGGGATTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCTTT 139687 Query 106651 GGCGGCTGGTACAATG--GCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGC 106707 | | || | ||| ||| || || | || ||| ||||||||| ||||||||| Sbjct 139686 TGAGCCTTG----ATGGTGCGACGGGCCTTGCCTTCCTTCTCGTACTTCTCGTAGAGGGC 139631 Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGA 106767 || |||||||| || | |||||| |||||| || || || || || | ||||| Sbjct 139630 CTCGAACTCCTCGCCGTACACGTCGGCGAGACCGGGGCACTCGTTGGGGCACATCAGAGA 139571 Query 106768 CCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAA 106827 ||| | || || || || | ||||||||| | ||| |||||||| || | | || Sbjct 139570 CCACTCGCCGTTCTGTTCGACTCTCTTCATGAACAAGTCGGGAATCCAGAGAGCGTAGAA 139511 Query 106828 GAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCAT 106887 ||| |||| | || |||| || | || ||||| || | || |||||||| | Sbjct 139510 GAGCTCTCGAGCTCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAA 139451 Query 106888 GATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CC 106941 || || | |||||| ||||||| |||| || | | || ||||| || Sbjct 139450 GACGTCAGAGTGCCAGGGCTCAACGTAGATGGCAAAGGCGCC---GGGACGCTTGTTGCC 139394 Query 106942 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 107001 | |||| | || || || || ||| ||| | || || ||||| || | ||| || | Sbjct 139393 ACCTTGGTCGACGTATCGAGCGGTGTTGTTGTAGACTCGCAGCATGGGCACAATCCCGTT 139334 Query 107002 TGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGC 107059 || || || || ||| ||| || ||| | || | | | || |||| Sbjct 139333 GGAGAAGCCGTTGGTGCCCGCGATGTAGGAG--CCAGTGCCACGGATGCAGTGAATGTTG 139276 Query 107060 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119 | |||||||| || || ||| || || || | | || || | |||||| Sbjct 139275 AGACCAATACCACCGGCAGTCTTGCTTATCATGGCGCAGGTCTTGAGGGTGTCGTAGATA 139216 Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179 || | ||| ||||| ||||| ||| || |||||||| |||| ||| || | ||| Sbjct 139215 CCTTCGATGGAGTCGTCCTTCATGGTGACCAGGAAGCACGAAGACAGCTGAGGGTTGGGT 139156 Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTC 107238 || || || |||||||| || || | || || |||| ||| | | |||||| || Sbjct 139155 GTGCCGGCGTTGAAGAGAGTGGGCGAGGCATGTGTGAA-GTACTTCTCCGACATCAGGTT 139097 Query 107239 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAA 107298 ||||||||| | | ||| || |||||| |||||||| |||| ||| |||||||| | Sbjct 139096 GTATGTCTCGATGGCAGCGTCGATGTCTCGGCCGTGGATACCGACGGCGACACGCATCAG 139037 Query 107299 CATGTATTGGGG 107310 ||||| ||| || Sbjct 139036 CATGTGTTGCGG 139025 >seq35 Length=115666 Score = 105 bits (116), Expect = 8e-18 Identities = 121/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| || || || |||||| ||| || ||||| |||||| ||||| Sbjct 64716 GGCAAAGTCGGTGTGCAGGCCTTCGTCTCGGCTAATCAGCTCATTCGAGAAGGTCAGGCC 64657 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 117391 ||||| ||||| |||||||||| |||| | || | |||| || || || |||||||||| Sbjct 64656 GGGCATCAGACCGCGCTTCTTCAGCCAAAAGATGGACGCA-AACGAGCCAGAGAAGAAGA 64598 Query 117392 TACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 | ||||| || ||||| |||| |||||||| || || Sbjct 64597 TGCCCTCGACGGCAGCAAAGGCAATCAGGCGCTCAGCAAA 64558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975143559080