Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq35 105 8e-18 >seq35 Length=115666 Score = 105 bits (116), Expect = 8e-18 Identities = 121/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 || || |||||||| |||| ||||| || ||||| ||||||||||| || || || Sbjct 64558 TTTGCTGAGCGCCTGATTGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTT- 64616 Query 65131 TGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGA 65189 |||| | || | |||| |||||||||| ||||| ||||| ||||| |||||| ||||| Sbjct 64617 TGCGTCCATCTTTTGGCTGAAGAAGCGCGGTCTGATGCCCGGCCTGACCTTCTCGAATGA 64676 Query 65190 ACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || ||| |||||| || || || ||| || |||||| Sbjct 64677 GCTGATTAGCCGAGACGAAGGCCTGCACACCGACTTTGCC 64716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563880388960