Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq69 95.1 4e-14 >seq69 Length=78241 Score = 95.1 bits (104), Expect = 4e-14 Identities = 211/311 (68%), Gaps = 12/311 (4%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| |||||| || | ||||| ||||||||||| || || || || || Sbjct 38624 TCTTCCAGCGCCTTGATCAATCTGCGCTGGATATAACCAGTCTCAGCCGTCTTGACCGCA 38683 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTT--CCGGTCGTA 302689 || || ||||| || | ||||| |||| || |||||||| | ||||| ||||| | Sbjct 38684 GTGTCGATTAGTCCTTCGCGACCTGCCATGGCGTGGAAGAAGAACTCTTGCGCGGTC--A 38741 Query 302690 GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CGAATCGTCGAACTT 302747 | || | | | ||| |||| || || || || ||||| ||| ||| ||| Sbjct 38742 GACCACGGAGGTACGAGTTCTCGACAAAGCCTCGGCTTTCGGGACTGAA--GTCATCCTT 38799 Query 302748 GGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTT 302807 |||||||||||||| |||| || ||||| | || ||||| ||||| || ||| | Sbjct 38800 GGTAAAGTGTGGCAACGTCCGGTAGCGGAAGCCGAAAGGAATACGTTTTCCCTCCACGAT 38859 Query 302808 CTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCACTGCCCTTGGAGCCA 302865 ||||| || | || | ||||||||| || || | || | ||||| || ||| Sbjct 38860 TTGCTGACCGACACAGGCTGACATCTGCGAGATGTTGATGAACGA--ACCCTTCGAACCA 38917 Query 302866 GCATTTACCAT 302876 ||| |||||| Sbjct 38918 GCAGCTACCAT 38928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471803136172479