Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq23 152 6e-31 seq35 147 3e-29 seq158 127 2e-23 seq151 87.8 2e-11 seq136 87.8 2e-11 seq69 87.8 2e-11 >seq23 Length=147171 Score = 152 bits (168), Expect = 6e-31 Identities = 206/287 (72%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||||||||| || || |||| ||| |||| || ||||||||||| | |||||||| Sbjct 139389 TGGTCGACGTATCGAGCGGTGTTGTTGTAGACTCGCAGCATGGGCACAATCCCGTTGGAG 139330 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||||||||||||||| | ||||| ||| | | | || | ||| | | || Sbjct 139329 AAGCCGTTGGTGCCCGCGATGTAGGAGCCAGTGCCACGGATGCAGTGAATGTTGAGACCA 139270 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || ||||| | |||| || | ||||| ||||| ||||||||||| || ||| Sbjct 139269 ATACCACCGGCAGTCTTGCTTATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCTTCG 139210 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || |||||| |||||||| || || |||||||| || || |||| | |||||| Sbjct 139209 ATGGAGTCGTCCTTCATGGTGACCAGGAAGCACGAAGACAGCTGAGGGTTGGGTGTGCCG 139150 Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACAT 1630352 ||||||||||| ||||||| || ||||| ||| | |||||| Sbjct 139149 GCGTTGAAGAGAGTGGGCGAGGCATGTGTGAAGTACTTCTCCGACAT 139103 Score = 118 bits (130), Expect = 1e-20 Identities = 290/441 (66%), Gaps = 12/441 (3%) Strand=Plus/Minus Query 1628166 GACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGT 1628225 || |||||| ||||||| ||||| || | | ||||| ||||||| |||||||| | Sbjct 139825 GATGATCTCAGTGCACAAGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGGACTT 139766 Query 1628226 CAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGAC 1628285 ||||| | |||||||||| ||||||| |||| ||| |||||| |||| ||| ||| Sbjct 139765 GCGGTTGGCAGCGTCCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGGGCCTCGAG 139706 Query 1628286 GATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCG-CGCGCG--GCCCTNNNNNNN 1628342 |||||| |||||| || | || | || || || || || ||| | Sbjct 139705 GATGGCGTACCAGAGCTTTTGAGC---CTTGATGGTGCGACGGGCCTTGCCTTCCTTCTC 139649 Query 1628343 NNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCAC-TCGTGCAGGCCGGGCGCCT 1628401 || || || ||||||| ||| ||| || ||||| || Sbjct 139648 GTACTTCTCGTAGAGGGCCTCGAACTCCTCGCCGTA-CACGTCGGCGAGACCGGGGCACT 139590 Query 1628402 CGGACGGACAAAAGAGCGACCAGTCGCCA--CCGGTCACCGCGCGGCGCATAAAGAGGTC 1628459 || || || | || ||||| ||||| | | || | | | | || || | ||| Sbjct 139589 CGTTGGGGCACATCAGAGACCACTCGCCGTTCTGTTCGACTCTCTTC--ATGAACAAGTC 139532 Query 1628460 ACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTT 1628519 |||| || ||||| ||||| || || || ||| ||||||||||||||||||||| Sbjct 139531 GGGAATCCAGAGAGCGTAGAAGAGCTCTCGAGCTCGGACCTCCTCCTTGCCGTGGTTCTT 139472 Query 1628520 TTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGC 1628579 ||||||||| | |||| | ||| | |||||| ||||| | |||| ||||||||| Sbjct 139471 GCGGAGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAACGTAGATGGCAAAGGC 139412 Query 1628580 GCCCTTGCGCTTGCCGCCGCC 1628600 ||| |||||| ||| || Sbjct 139411 GCCGGGACGCTTGTTGCCACC 139391 Score = 98.7 bits (108), Expect = 1e-14 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGA 1627393 ||||||| || || ||||| | || || ||||| ||||| | |||| ||||| Sbjct 140456 GGTTGACGACTTGGAACTCGCCGGCCAGGACTCGGCGGGTGTAAAGGTTGCTGGTGTAAG 140397 Query 1627394 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 1627453 |||| | |||| || ||| || ||||| || |||| ||| || |||||| | || | Sbjct 140396 GCTCGAAGCACTCGTTGAAGCCAAGAATCTGAGAGGTCGAGGCAGTCGGCATGGGTGCGA 140337 Query 1627454 CGAGGAGCGAGTTGCGCAGGCCGT-GCTGTCGAACTAGCGCGCGCAGCGCGTCCCAGTCC 1627512 ||||||||||||||| ||||||| | || ||| || || | ||| || |||||||| Sbjct 140336 GGAGGAGCGAGTTGCGGAGGCCGTGGGTGGCGATCTTCTGCTTG-AGCTCGGCCCAGTCC 140278 Query 1627513 CAGCGGCCGCT 1627523 ||| ||| ||| Sbjct 140277 CAGAGGCTGCT 140267 >seq35 Length=115666 Score = 147 bits (162), Expect = 3e-29 Identities = 210/288 (73%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 |||||||| || || |||| || || |||| ||||||||||| || ||||||||| Sbjct 64697 CCTTCGTCTCGGCTAATCAGCTCATTCGAGAAGGTCAGGCCGGGCATCAGACCGCGCTTC 64638 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 || ||||||||||||| |||| || ||| ||||| ||||||||||||||||| ||||| Sbjct 64637 TTCAGCCAAAAGATGGACGCA-AACGAGCCAGAGAAGAAGATGCCCTCGACGGCAGCAAA 64579 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGA--GGCCCTCCTTGTTGATCCACTTCATCGCC 869356 | | || || ||||| ||||| |||||| || || | ||||||| || ||| Sbjct 64578 GGCAATCAGGCGCTCAGCAAA--TGTCGACTGGGTGTC---GCTGATCCATCGGATAGCC 64524 Query 869357 CAGTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 || |||| |||||| || |||| || | || ||||||||| || |||| || Sbjct 64523 CACTCGG-CTTTTTGCTTGACGACGGGAATGGTCTCGATGGCGTCGAACAGGTACTCGCG 64465 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || || | ||| | ||| |||||||| ||||| || || ||||| Sbjct 64464 TTGCGCAGAGTCGCGAATATATGTGTCGATGAGGAGAGAGTATGTCTC 64417 Score = 104 bits (114), Expect = 3e-16 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 868721 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC 868780 || ||||| ||||| || | || || || |||||| | ||| ||||| | || Sbjct 64982 AAGAAGTTCGTCTTCCCTTGCAGAGAAATGTTCTCCATAAAGTCGAAGGGGTTCGTCGCA 64923 Query 868781 TTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTAC 868840 ||||||||||| ||| || ||||| | || || |||||||| ||||||||||||||| Sbjct 64922 TTGTAGTGCTTCTCGTTACCAAGCGAAACCAGTAGACGGTCGGCAACAAACTCGATGTAC 64863 Query 868841 TGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCA 868895 || ||| || | ||||||||||||||| || | || ||||| | ||| ||| Sbjct 64862 TGAGTCATCAGCCGGGCGTTCATGCCGATCAGTGATACTGGCAGAGCATCGGTCA 64808 Score = 100 bits (110), Expect = 3e-15 Identities = 162/231 (70%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTTCATGAACCGGCC 869712 ||||||||||||||| ||| | |||| || |||| ||||| |||| || | Sbjct 64315 GATCTGGAAGCCGTAGAAGCATCGGGCCTCAGCTGCTTGTACCTCGGAACTGAATCGCTC 64256 Query 869713 GGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGAT 869772 | | |||||||| || || ||||| || || || || || |||||||| |||| Sbjct 64255 GACAAGGTTCTCATTGACAATTCCGTCTGAAGCAGCAAAGAAGGCGAGGACGTGGCTGAT 64196 Query 869773 AAAGTGGCGCTCGTCGTCGCTGAGC--GACA-CCCAGTGGACGGTGTCGGCGCTGAGGTC 869829 ||||||||||||| |||| | ||| | | |||| | | |||| | ||||| Sbjct 64195 GAAGTGGCGCTCGTTGTCGTTCAGCCGGTTATCCCAATCGTGCATGTCCTTGGACAGGTC 64136 Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880 | ||| || |||||||||| ||| ||||| ||||| |||||||| | ||| Sbjct 64135 GATCTCTTCAGCGGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTGCCA 64085 >seq158 Length=40353 Score = 127 bits (140), Expect = 2e-23 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111 |||||||||||| || || |||||| ||| |||||| || ||||||||||||| Sbjct 27187 CATCGGCGGCACCGTCACCTGCGTGATTCGAGGCGTGCCTCTCGGAATCGGCGAGCCGTG 27128 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 |||||||||| |||||||| |||||| ||||| ||| |||| ||||| |||||||||| Sbjct 27127 CTTTGACAAGCTCGAGGCCAAGCTCGCACACGCAATGATGTCCATCCCTGCCACCAAGGC 27068 Query 19172 ATTCGAGATTGGC 19184 || ||||||||| Sbjct 27067 CTTTGAGATTGGC 27055 Score = 125 bits (138), Expect = 9e-23 Identities = 273/409 (67%), Gaps = 6/409 (1%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 |||||||||| |||||||| ||| | || ||| ||||||||| |||||||||| || Sbjct 27873 GTCACCACCTACGGCGAGTCCCACTGCGCCTCCGTAGGCTGCATCGTCGACGGCGTACCC 27814 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 || | ||| | || |||| |||||| ||||| ||| | ||||| || || ||| Sbjct 27813 CCCGGAATGGCCCTCTCCGACGCCGACGTCCAGGTCCAGCTCAGCCGGCGTCGTCCCGGC 27754 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| | || |||| |||||| ||||| || ||| |||||||||||| Sbjct 27753 CAGTCCAACCTGACCACCCCGCGCGACGAGAAGGACAAGGTCCAGATCCAGTCGGGCGTC 27694 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 || || ||| |||| || || | ||| | | | | || |||| |||||||| Sbjct 27693 GAAAAGGGCGTCACCCTGGGTACTCCCATTGCCATGCGGGTCCAGAACCAGGACCAGCGC 27634 Query 18328 CCCGTCGACTATTCCGA------CATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTAC 18381 || |||||| |||| | | | ||||| || || ||||| |||||| Sbjct 27633 CCGAACGACTACACCGATCGGACCCTCGACCTCTACCCGCGCCCATCCCACGCAGACTAC 27574 Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGC 18441 |||||| | | |||||||| ||||||| || || || || || || || || Sbjct 27573 ACCTACCTCGAGAAGTACGGTGTCAAGGCCAGCTCCGGGGGCGGGCGCAGCTCGGCGCGT 27514 Query 18442 GAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGGCTCG 18490 ||||| | || ||||| |||||||| |||||||| || | |||| Sbjct 27513 GAGACGATTGGTCGAGTCGCAGCCGGCGCCGTCGCCGAAAAGTACCTCG 27465 >seq151 Length=41452 Score = 87.8 bits (96), Expect = 2e-11 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 1726732 CCCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCC--GACGCCATCTCGCGG 1726789 ||| |||||||||||||||||||||||||| || || ||| || || | ||| ||| Sbjct 40518 CCCATCGGTGCCGTTCTTGAAGCCGATGGC--GCATGAGAGCCCGGAGGCGAGCTCTCGG 40461 Query 1726790 TGCACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCA 1726830 |||||||| ||||||||| |||||||| | ||| ||||| Sbjct 40460 TGCACCTGCGACTCGGTCGTCCGCGCGCCAATGGCACCCCA 40420 >seq136 Length=45425 Score = 87.8 bits (96), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||| || || ||| ||| || || ||||| || |||||||| || | || Sbjct 6285 GCTTGGACAGCTCTCCTGGCAGGATGAGTCGGACGGCTGTTTGGATCTCACGGGCAGAGA 6344 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| | || || | |||||| | ||||||| || | | Sbjct 6345 TGGTCGACTTCTTGTTGTAAGAGGCGAGCTTGGAGGCCTCACCGGCGATGCGCTCAAAGA 6404 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||| || ||||||| || | ||| | |||||||||||| || |||||||| Sbjct 6405 TGTCTTGGACGAAGGAGTTCAGGATAGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGT 6464 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| || ||||||| Sbjct 6465 GCACCTGCTTGAGGACACGGTAGATG 6490 >seq69 Length=78241 Score = 87.8 bits (96), Expect = 2e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 509036 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 509095 ||||| ||||| |||||||| ||||||||| || || || | | ||| ||| | Sbjct 38784 CCCGAAAGCCGAGGCTTTGTCGAGAACTCGTACCTCCGTGGTCTGACCGCGCAAGAGTTC 38725 Query 509096 TTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAG 509155 || | ||| || | || ||||| || || ||||||| || ||||||||||| ||| Sbjct 38724 TTCTTCCACGCCATGGCAGGTCGCGAAGGACTAATCGACACTGCGGTCAAGACGGCTGAG 38665 Query 509156 ACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGA 509193 || || || ||||||||| | | |||||| || |||| Sbjct 38664 ACTGGTTATATCCAGCGCAGATTGATCAAGGCGCTGGA 38627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107076256388139