Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq23 286 3e-72 seq32 132 5e-26 seq4 132 5e-26 seq142 131 2e-25 seq35 131 2e-25 seq25 129 6e-25 seq119 111 2e-19 >seq23 Length=147171 Score = 286 bits (316), Expect = 3e-72 Identities = 1114/1726 (65%), Gaps = 69/1726 (4%) Strand=Plus/Minus Query 148068 ATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGCC 148127 |||||||| || ||||| |||||||| || |||| |||| | ||||||||| || Sbjct 140646 ATGAACGCTCCTCGGTCGGCGGCCATGTCTATGATGACCTTTTGCGAGATCTCCCAGACC 140587 Query 148128 GTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGG 148187 |||||||| || |||||| | || ||||||||| | | || | |||||| | | Sbjct 140586 GTCTTGTAGAGAGCCTTGATGCGGTCAGGAATGCCGGGCACGTTTTGAATCGAGCCACCG 140527 Query 148188 TGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCG 148247 || |||| || | || ||| | || | | || |||| | || ||| Sbjct 140526 TGGGCAATGATACGGTTCTTCATCTGCTCGTTCCACAGACCTTGCTCCACGAGCTCACGC 140467 Query 148248 ATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTG 148307 | || | | || || || || ||||||||||| || || || || || | |||| Sbjct 140466 AGGAGCCAAGGGTTGACGACTTGGAACTCGCCGGCCAGGACTCGGCGGGTGTAAAGGTTG 140407 Query 148308 CTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGC 148367 || || | || || || |||||||| ||| | |||||| | ||||| || || ||| Sbjct 140406 CTGGTGTAAGGCTCGAAGCACTCGTTGAAGCCAAGAATCTGAGAGGTCGAGGCAGTCGGC 140347 Query 148368 ATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCC 148427 ||| || | || ||||||||||| | ||| | | || || |||| || | Sbjct 140346 ATGGGTGCGAGGAGGAGCGAGTTGCGGAGGCCGTGGGTGGCGATCTTCTGCTTGAGCTCG 140287 Query 148428 GCCCAGTCCCAGAG-CGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG 148486 |||||||||||||| | || ||||| ||| ||| | |||||| || || ||| Sbjct 140286 GCCCAGTCCCAGAGGCTGCTG-GGTGTAACGCCCCAAAAGTCGTATTGGAGCTCGCCCTT 140228 Query 148487 GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCT 148546 ||| || |||||||| |||| | ||| | || || | || || | ||||| | Sbjct 140227 GCTGGCAGGGCTGCCGGCGTATGTCTCGTAGGTGCCCAGCTCAGCAGCAATCTCGCA-CG 140169 Query 148547 CGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCG 148605 || |||||| ||| ||| ||| || ||||| ||||| |||| ||| | ||| Sbjct 140168 AGCGCTCGAGAGCGGCGTGGTAGATAGTCTCAAAGATTTGAATGTTAAGCTTCTTGGCCT 140109 Query 148606 ACTCGCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCC 148664 ||| ||| | | |||| | || || || || ||||| || || | || || Sbjct 140108 CGGGGCTGTCGAAAG-CATATCCCATGATCATGAAGGCATCGGCGAGACCGTTGACACCG 140050 Query 148665 ACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGA-TAGTGGTT 148723 | |||||||| ||||| | |||||| || ||| || ||| |||| ||| Sbjct 140049 ATACCAATGGGACGGTGGCGGAAGTTGGACTTCTTAGC-CTCGGGAACGGGGTAGTAGTT 139991 Query 148724 GCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATT 148782 | |||||||||||||| |||| | |||| || ||||| || | | ||| | Sbjct 139990 GATGTCGATGATCTTGTTCAAGTTGCCGCAG-ACAACCTTGGTGACCTCATGGAGCTTCT 139932 Query 148783 CAAAATCGTAC------------------TTGTCATCTACGATGCATCGGTTCACGGCGA 148824 || ||||| ||||| | |||| | | | ||| | Sbjct 139931 TGAAGTCGTATGTGCGGGTGTTGGTTTGGTTGTCGTAGTTGATGTAGGAGGGGAGGGCCA 139872 Query 148825 TAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGC 148884 | || | ||||| || || |||||| || || ||||| || | |||||| | || Sbjct 139871 TGCTAGCCAAGTTGCAGACAGCGACCTCATCAGGAGCACTGTATTCGATGATCTCAGTGC 139812 Query 148885 ACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGT 148944 ||| ||| ||| ||||| || | |||||| || ||| ||||| |||| |||| Sbjct 139811 ACAAGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGGACTTGCGGTTGGCAGCGT 139752 Query 148945 CCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGCA 149004 ||||||| |||||| | || |||||| || ||| | || | ||| || || Sbjct 139751 CCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGGGCCTCGAGGATGG--CGTACCA 139694 Query 149005 GGTCCTGCGCGCGCACTTGCTGCT-CGTAGCGAC----CCTCCTGCTCGTA--TAAAGTA 149057 | | | | || |||| || | || | | | | |||| |||||| | ||| Sbjct 139693 GAGCTTTTGAGC---CTTGATGGTGCGACGGGCCTTGCCTTCCTTCTCGTACTTCTCGTA 139637 Query 149058 TACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCAC 149117 | ||| |||||| |||||||||| ||| ||||||||||||||| || |||||| Sbjct 139636 GAGGGCC--TCGAACTCCTCGCCGTACACGTCGGCGAGACCGGGGCACTCGTTGGGGCAC 139579 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 || || |||||| |||||| | | || | |||||| |||| ||||| | |||||| Sbjct 139578 ATCAGAGACCACTCGCCGTTCTGTTCGACTCTCTTCATGAACAAGTCGGGAATCCAGAGA 139519 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237 ||||| | ||| || || || | || || ||| ||| ||| |||| ||| Sbjct 139518 GCGTAGAAGAGCTCTCGAGCTCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGG 139459 Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC--- 149294 | ||| | ||| | |||||| ||||||| ||| | || | ||||| ||| Sbjct 139458 AACTCGAAGACGTCAGAGTGCCAGGGCTCAACGTAGATGGCAAAGGCGCCGGGACGCTTG 139399 Query 149295 TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354 ||||| || |||||||||| || | ||||||| | ||||| | ||| || |||| Sbjct 139398 TTGCCACCTTGGTCGACGTATCGAGCGGTGTTGTTGTAGACTCGCAGCATGGGCACAATC 139339 Query 149355 CCACTGGCAGTGCCGTTAGT-----AGAGCTA-ATGCGACTGCCGCGCGCTCGCACTTTG 149408 || ||| |||||| || || || || | |||| || | | ||| | Sbjct 139338 CCGTTGGAGAAGCCGTTGGTGCCCGCGATGTAGGAGCCAGTGCCACG-GAT-GCA----G 139285 Query 149409 TGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTC 149468 || | ||||| || || || ||| | ||| || |||||| ||| || Sbjct 139284 TGAATGTTGAGACCAATACCACCGGCAGTCTTGCTTATCATGGCGCAGGTCTTGAGGGTG 139225 Query 149469 GAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGC 149528 |||||| || |||||| |||| ||||||||| | ||| |||||||| ||| || Sbjct 139224 TCGTAGATACCTTCGATGGAGTCGTCCTTCATGGTGACCAGGAAGCACGAAGACAGCTGA 139165 Query 149529 GGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTC 149588 || | |||||||| ||| | ||||| ||| ||||| || || |||| | Sbjct 139164 GGGTTGGGTGTGCCGGCGTTGAAGAGAGTGGGCGAGGCATGTGTGAAGTACTTCTCCGAC 139105 Query 149589 ATCATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGA 149646 |||| | ||| | ||||| ||| || ||| ||||| ||| ||||| || | ||||| Sbjct 139104 ATCAGGTTGTATGTCTCGATGGCA-GC-GTCGATGTCTCGGCCGTGGATACCGACGGCGA 139047 Query 149647 CGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTG---AGCAAGT 149703 | ||||||||||| || ||||| ||||| || || ||| ||| | || |||| || Sbjct 139046 CACGCATCAGCATGTGTTGCGGCCGCTCAGCAACCTTG---CCATTGATGCGCAGCAGGT 138990 Query 149704 AGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACT--TGTAGTCAAAG 149747 | |||| || |||||| |||||||||| | |||||| |||| Sbjct 138989 ATGATCTTTCGAGAGTCTTGAAGCCAAAGTAGTTCTGTAGTGAAAG 138944 >seq32 Length=118755 Score = 132 bits (146), Expect = 5e-26 Identities = 151/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| ||| |||||||||||||||||| Sbjct 111276 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACC-GTCCTCGAGCTGCTTGCC 111334 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||| ||||| || || || || |||||||| |||||| ||| Sbjct 111335 GGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTT 111394 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | || || |||| ||| | || |||||||| ||||| Sbjct 111395 GACATTGTCGATGGTGTCGGAAGATTCGACCTCGAGGGTAATAGTCTTGCCGGTGAGAGT 111454 Query 133643 TTTTACGAAAATCTGCATGG 133662 |||||||| || ||||||| Sbjct 111455 CTTTACGAAGATTTGCATGG 111474 >seq4 Length=308026 Score = 132 bits (146), Expect = 5e-26 Identities = 151/201 (75%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTG 133520 ||||||||| ||||| || ||||| || | | | | ||| ||||||||||||||| Sbjct 60532 GGTGGACTCCTTCTGGATGTTGTAGTC--CGAAAGAGTACGGCCATCCTCGAGCTGCTTG 60475 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||| ||||| ||||| ||||| |||||||| |||||| | Sbjct 60474 CCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTC 60415 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||||| || |||||| |||| ||||| || || || || || Sbjct 60414 TTGACATTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGTCTTACCCGTGAGG 60355 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || ||||||||||||||| Sbjct 60354 GTCTTGACGAAAATCTGCATG 60334 >seq142 Length=44629 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| |||||||| ||| | ||| ||| || |||||||| || Sbjct 44300 GTCGACTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGGCCGTCTTCAAGCTGCTTTCCG 44359 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| ||||| ||||| ||||| ||||| |||||||| |||||| |||| Sbjct 44360 GCGAAGATGAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTG 44419 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | || ||| || |||| ||||| ||| ||||||||||| || Sbjct 44420 ACGTTGTCGATAGTGTCCGAGGACTCGACTTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 44479 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 44480 TTGACGAAGATCTGCAT 44496 >seq35 Length=115666 Score = 131 bits (144), Expect = 2e-25 Identities = 327/490 (67%), Gaps = 19/490 (4%) Strand=Plus/Minus Query 120372 CTCAAAA-AAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAACGGGTTGC 120430 |||| || ||||| || || || | || |||||||| | |||||| ||||| ||||| Sbjct 64987 CTCACAAGAAGTTCGTCTTCCCTTGCAGAGAAATGTTCTCCATAAAGTCGAAGGGGTTCG 64928 Query 120431 TCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACAAACTCAA 120490 |||| || ||| ||| | || | | || || || ||||| || |||||||| | Sbjct 64927 TCGCATTGTAGTGCTTCTCGTTACCAAGCGAAACCAGTAGACGGTCGGCAACAAACTCGA 64868 Query 120491 TGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGCCGACGTGA 120550 |||||| ||| | | ||||||||||| | || | || |||| || || | Sbjct 64867 TGTACTGAGTCATCAGCCGGGCGTTCATGCCGATCAGTGATACTGGCAGAGCATCGGTCA 64808 Query 120551 AAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAGCATAGTGTGGCCGGGCA 120610 || | | |||||| ||||||||| | | || |||| ||| | |||| Sbjct 64807 GGAAAGCTTGTTCAATGGTCACCGCCTCGCTAATGATTCTCAGCACAGTCT---CGGGA- 64752 Query 120611 TCTTGTGTTCGATGC--GCGTTCG--GTAGTACAGGCACGCAAAGTCCGTGTGCAGGCCC 120666 |||| || | | | | | | | | |||||| |||||||| ||||||||||| Sbjct 64751 ---TGTGGGCGCTTCTTGAGGTGGCCGAACAGCAGGCAGGCAAAGTCGGTGTGCAGGCCT 64695 Query 120667 TCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTG 120726 ||||| || |||||||| || || |||||||||||||| | || | |||| Sbjct 64694 TCGTCTCGGCTAATCAGCTCATTCGAGAAGGTCAGGCCGGGCATCAGACCGCGCTTCTTC 64635 Query 120727 ATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCG 120786 | | || |||| ||||| ||| || ||||| | |||||| ||| |||||||| Sbjct 64634 AGCCAAAAGATGGACGCAAACGAGCCAGAGAAGAAGATGCCCTCGACGGCAGCAAAGGCA 64575 Query 120787 ACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCG---ATCCACTTCATGGCCCACTCG 120843 | || |||||| || || |||| | | | ||||| ||||| || ||||||||| Sbjct 64574 ATCAGGCGCTCAGCAAATGTCGAC---TGGGTGTCGCTGATCCATCGGATAGCCCACTCG 64518 Query 120844 GCCTTTTTGC 120853 | |||||||| Sbjct 64517 G-CTTTTTGC 64509 >seq25 Length=137175 Score = 129 bits (142), Expect = 6e-25 Identities = 143/189 (76%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || ||||||||| | ||| || || ||||||||||||||| Sbjct 84053 GGTGGACTCCTTCTGGATGTTGTAATCGGAGAGCGTTCGGCCG--TCCTCGAGCTGCTTG 84110 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || || || ||||| ||||| ||||| |||||||| |||||| | Sbjct 84111 CCGGCGAAGATCAGACGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTC 84170 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | |||| ||||||| || |||||| |||| ||||| || || ||||| || Sbjct 84171 TTGACGTTGTCAATGGTGTCGGAGGACTCCACCTCGAGGGTGATCGTCTTCCCGGTGAGG 84230 Query 133641 GTTTTTACG 133649 || || ||| Sbjct 84231 GTCTTGACG 84239 >seq119 Length=54761 Score = 111 bits (122), Expect = 2e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| | ||| ||| || ||||||||||| Sbjct 54749 GGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCTTCAAGCTGCTTGCC 54690 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || || || ||||| ||||| ||||| |||||||| ||||| ||| Sbjct 54689 GGCGAAAATCAGGCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGTCTT 54630 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 || | |||| ||||||| || ||| || |||| |||| ||| |||||||||| Sbjct 54629 GACATTGTCAATGGTGTCGGAGGACTCAACCTCGAGAGTGATGGTCTTGCCGGTCA 54574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483416165203080