Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 7e-11 >seq4 Length=308026 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||| | || | || | | | ||||| || || ||||||||||| | || Sbjct 60556 ACGCAGGCGAAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGT 60497 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||| |||||||| || |||| |||| || |||||||| || ||||| ||||| Sbjct 60496 ACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCC 60437 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || || | | || | || |||| | |||||| |||| Sbjct 60436 CTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCGAG 60377 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || ||||| || || || || | ||||||||||||| Sbjct 60376 GGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATG 60334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476606630490120