Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq17 82.4 9e-11 >seq17 Length=164878 Score = 82.4 bits (90), Expect = 9e-11 Identities = 118/164 (72%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAA 147290 ||| ||||| || || || || ||||| ||| |||| || | || |||| ||||| Sbjct 147461 CAGTTGGTCTACACCTTGTCCAGAGTAGTCTGTGTCGCAATCGATATATTTGGCTCCAAA 147520 Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350 ||| | ||||||||| ||||||||||| ||||||||||| || || || ||||| Sbjct 147521 GTGTCGCCACTGGAATCCGTACACTGGGCCCAGGTCGCCTTCGCGTCGATGTGACAAGCC 147580 Query 147351 -CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATG 147393 || | | || |||||| | ||||||| | | ||||| ||| Sbjct 147581 ACGGGAG-TCCAGGAACTCGCGCGACCCGTTGCCATCCCAAATG 147623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583482405808800